Bayesian calibration, validation, and uncertainty quantification of diffuse interface models of tumor growth

被引:78
作者
Hawkins-Daarud, Andrea [1 ]
Prudhomme, Serge [2 ]
van der Zee, Kristoffer G. [3 ]
Oden, J. Tinsley [2 ]
机构
[1] Northwestern Univ, Chicago, IL 60611 USA
[2] Univ Texas Austin, Austin, TX 78712 USA
[3] Eindhoven Univ Technol, NL-5600 MB Eindhoven, Netherlands
基金
美国国家科学基金会;
关键词
Bayesian probability; Calibration; Validation; Uncertainty quantification; Tumor growth models; FINITE-DIFFERENCE; SIMULATION; MECHANICS; INVASION;
D O I
10.1007/s00285-012-0595-9
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The idea that one can possibly develop computational models that predict the emergence, growth, or decline of tumors in living tissue is enormously intriguing as such predictions could revolutionize medicine and bring a new paradigm into the treatment and prevention of a class of the deadliest maladies affecting humankind. But at the heart of this subject is the notion of predictability itself, the ambiguity involved in selecting and implementing effective models, and the acquisition of relevant data, all factors that contribute to the difficulty of predicting such complex events as tumor growth with quantifiable uncertainty. In this work, we attempt to lay out a framework, based on Bayesian probability, for systematically addressing the questions of Validation, the process of investigating the accuracy with which a mathematical model is able to reproduce particular physical events, and Uncertainty quantification, developing measures of the degree of confidence with which a computer model predicts particular quantities of interest. For illustrative purposes, we exercise the process using virtual data for models of tumor growth based on diffuse-interface theories of mixtures utilizing virtual data.
引用
收藏
页码:1457 / 1485
页数:29
相关论文
共 39 条
[11]   Contour Instabilities in Early Tumor Growth Models [J].
Ben Amar, M. ;
Chatelain, C. ;
Ciarletta, P. .
PHYSICAL REVIEW LETTERS, 2011, 106 (14)
[12]  
Byrne H, 2003, MATH MED BIOL, V20, P341
[13]   The role of growth factors in avascular tumour growth [J].
Byrne, HM ;
Gourley, SA .
MATHEMATICAL AND COMPUTER MODELLING, 1997, 26 (04) :35-55
[14]   An L(infinity) bound for solutions of the Cahn-Hilliard equation [J].
Caffarelli, LA ;
Muler, NE .
ARCHIVE FOR RATIONAL MECHANICS AND ANALYSIS, 1995, 133 (02) :129-144
[15]  
CHAPLAIN MAJ, 1993, J MATH BIOL, V31, P431, DOI 10.1007/BF00173886
[16]   THE THERMODYNAMICS OF ELASTIC MATERIALS WITH HEAT CONDUCTION AND VISCOSITY [J].
COLEMAN, BD ;
NOLL, W .
ARCHIVE FOR RATIONAL MECHANICS AND ANALYSIS, 1963, 13 (03) :167-178
[17]  
Coleman H. W., 2009, Uncertainty analysis for uncertainty analysis for engineers, VThird
[18]   Nonlinear simulations of solid tumor growth using a mixture model: invasion and branching [J].
Cristini, Vittorio ;
Li, Xiangrong ;
Lowengrub, John S. ;
Wise, Steven M. .
JOURNAL OF MATHEMATICAL BIOLOGY, 2009, 58 (4-5) :723-763
[19]   MATHEMATICAL-MODEL FOR THE EFFECTS OF ADHESION AND MECHANICS ON CELL-MIGRATION SPEED [J].
DIMILLA, PA ;
BARBEE, K ;
LAUFFENBURGER, DA .
BIOPHYSICAL JOURNAL, 1991, 60 (01) :15-37
[20]   On the Cahn-Hilliard equation with degenerate mobility [J].
Elliott, CM ;
Garcke, H .
SIAM JOURNAL ON MATHEMATICAL ANALYSIS, 1996, 27 (02) :404-423