The complete mitochondrial genome of Sasakia funebris (Leech) (Lepidoptera: Nymphalidae) and comparison with other Apaturinae insects

被引:19
|
作者
Wang, Ju Ping [1 ]
Cao, Tian Wen [1 ]
Xuan, Shan Bin [1 ]
Wang, Hui [2 ]
Zhang, Min [3 ]
Ma, En Bo [3 ]
机构
[1] Shanxi Acad Agr Sci, Inst Plant Protect, Taiyuan 030032, Peoples R China
[2] Shanxi Acad Agr Sci, Dept Sci Res Management, Taiyuan 030006, Peoples R China
[3] Shanxi Univ, Res Inst Appl Biol, Taiyuan 030006, Peoples R China
基金
中国国家自然科学基金;
关键词
Sasakia funebris; Mitochondrial genome; Lepidoptera; Apaturinae; Lepidopteran phylogeny; COMPLETE NUCLEOTIDE-SEQUENCE; DNA; PROGRAM; TRANSCRIPTION; ORGANIZATION; PHYLOGENIES; MITOGENOME; PRIMERS;
D O I
10.1016/j.gene.2013.05.036
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Sasakia funebris, a member of the lepidopteran family, Nymphalidae (superfamily Papilionoidea) is a rare species and is found only in some areas of South China. In this study, the 15,233 bp long complete mitochondrial genome of S. funebris was determined, and harbors the gene arrangement identical to all other sequenced lepidopteran insects. The nucleotide composition of the genome is highly A + T biased, accounting for 81.2%. All protein-coding genes (PCGs) start with typical ATN codons, except for COI which begins with the CGA codon. All tRNAs have a typical clover-leaf secondary structure, except for tRNA(Ser(AGN)), the dihydrouridine (DHU) arm of which forms a simple loop. The S. funebris A + T-rich region of 370 bp contains several features common to the Lepidoptera insects, including the motif ATAGA, followed by a 19 bp poly-T stretch, and two tandem repeats consisting of 18 bp repeat units and 14 bp repeat units. The phylogenetic analyses of Apaturinae based on mitogenome sequences showed: (S. funebris + Sasakia charonda) + (Apatura metis + Apatura ilia). This result is consistent with the morphological classification. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:336 / 343
页数:8
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