Methylation of the pseudogene PTENP1 5'-terminal region in endometrial cancer and hyperplasia

被引:5
作者
Kovalenko, T. F. [1 ]
Sorokina, A. V. [2 ]
Ozolinya, L. A. [3 ]
Patrushev, L. I. [1 ]
机构
[1] Russian Acad Sci, Shemyakin Ovchinnikov Inst Bioorgan Chem, Moscow 117997, Russia
[2] Res Inst Phys & Chem Med, Moscow 119828, Russia
[3] Pirogov Russian Natl Res Med Univ, Moscow 117997, Russia
基金
俄罗斯基础研究基金会;
关键词
DNA methylation; m(5)C; PTEN; PTENP1; pseudogene; endometrial cancer; competing endogenous mRNAs; ceRNAs; DNA METHYLATION; PROMOTER METHYLATION; GENE; CARCINOMA; EXPRESSION;
D O I
10.1134/S1068162013040109
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Genetic mutations in the PTEN tumor suppressor gene are often found in malignant human cells, and these changes in the genome are especially characteristic of endometrial cancer. The results of our previous studies indicate the possibility of an alternative epigenetic mechanism of PTEN inactivation in endometrial cancer via methylation of its promoter region. In addition, evidence for the participation of PTENP1 pseudogene in positive regulation of the PTEN gene expression has been recently published. Taking into account these facts, the methylation status of the minimal promoter of the tumor suppressor gene PTEN and the 5'-terminal sequence of its pseudogene PTENP1 in endometrial cancer and hyperplasia was investigated by various methods. It was found that the DNA of PTEN gene studied was not methylated. At the same time, the PTENP1 pseudogene region was methylated in more than 50% of cases in endometrial cancer (11/18) and hyperplasia (5/9), but not in most normal tissues studied. We assume that methylation of pseudogene sequences can inhibit its usually observed transcription, and in accordance with the concept of competing endogenous mRNAs (ceRNAs) may be accompanied by suppression of the PTEN gene expression by the mechanism of RNA interference. Thus, aberrant suppression of the PTENP1 transcription may contribute to the pathogenesis of endometrial cancer.
引用
收藏
页码:397 / 405
页数:9
相关论文
共 27 条
[1]   Programming of DNA Methylation Patterns [J].
Cedar, Howard ;
Bergman, Yehudit .
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 81, 2012, 81 :97-117
[2]   Epigenetic regulation of development by histone lysine methylation [J].
Dambacher, S. ;
Hahn, M. ;
Schotta, G. .
HEREDITY, 2010, 105 (01) :24-37
[3]   Methylation status of the PTEN gene in adenoid cystic carcinoma cells [J].
Fan, Xiaoping ;
Chen, Bin ;
Xu, Junli ;
Zhang, Huachang ;
Deng, Feng ;
Xiang, Xuerong .
MOLECULAR MEDICINE REPORTS, 2010, 3 (05) :775-779
[4]   DNA methylation: A profile of methods and applications [J].
Fraga, ME ;
Esteller, M .
BIOTECHNIQUES, 2002, 33 (03) :632-+
[5]   Transcriptional analysis of the PTEN/MMAC1 pseudogene, ΨPTEN [J].
Fujii, GH ;
Morimoto, AM ;
Berson, AE ;
Bolen, JB .
ONCOGENE, 1999, 18 (09) :1765-1769
[6]  
Gasser S. M., 2011, EPIGENETICS DIS PHAR
[7]   The mutational landscape of lethal castration-resistant prostate cancer [J].
Grasso, Catherine S. ;
Wu, Yi-Mi ;
Robinson, Dan R. ;
Cao, Xuhong ;
Dhanasekaran, Saravana M. ;
Khan, Amjad P. ;
Quist, Michael J. ;
Jing, Xiaojun ;
Lonigro, Robert J. ;
Brenner, J. Chad ;
Asangani, Irfan A. ;
Ateeq, Bushra ;
Chun, Sang Y. ;
Siddiqui, Javed ;
Sam, Lee ;
Anstett, Matt ;
Mehra, Rohit ;
Prensner, John R. ;
Palanisamy, Nallasivam ;
Ryslik, Gregory A. ;
Vandin, Fabio ;
Raphael, Benjamin J. ;
Kunju, Lakshmi P. ;
Rhodes, Daniel R. ;
Pienta, Kenneth J. ;
Chinnaiyan, Arul M. ;
Tomlins, Scott A. .
NATURE, 2012, 487 (7406) :239-243
[8]   A reinvestigation of somatic hypermethylation at the PTEN CpG island in cancer cell lines [J].
Hesson, Luke B. ;
Packham, Deborah ;
Pontzer, Emily ;
Funchain, Pauline ;
Eng, Charis ;
Ward, Robyn L. .
BIOLOGICAL PROCEDURES ONLINE, 2012, 14
[9]   Epigenetics and cancer [J].
Kanwal, Rajnee ;
Gupta, Sanjay .
JOURNAL OF APPLIED PHYSIOLOGY, 2010, 109 (02) :598-605
[10]   In Vivo Identification of Tumor-Suppressive PTEN ceRNAs in an Oncogenic BRAF-Induced Mouse Model of Melanoma [J].
Karreth, Florian A. ;
Tay, Yvonne ;
Perna, Daniele ;
Ala, Ugo ;
Tan, Shen Mynn ;
Rust, Alistair G. ;
DeNicola, Gina ;
Webster, Kaitlyn A. ;
Weiss, Dror ;
Perez-Mancera, Pedro A. ;
Krauthammer, Michael ;
Halaban, Ruth ;
Provero, Paolo ;
Adams, David J. ;
Tuveson, David A. ;
Pandolfi, Pier Paolo .
CELL, 2011, 147 (02) :382-395