Novel techniques for identification and characterization of proteins loaded on gels in femtomole amounts

被引:16
作者
Gevaert, K
DeMol, H
Verschelde, JL
VanDamme, J
DeBoeck, S
Vandekerckhove, J
机构
[1] Universiteit Gent,Flanders Interuniversity Institute for Biotechnology, Department of Biochemistry, Faculty of Medicine
来源
JOURNAL OF PROTEIN CHEMISTRY | 1997年 / 16卷 / 05期
关键词
gel electrophoresis; peptide femtomole sequencing; peptide mass fingerprinting; matrix-assisted-laser-desorption-ionization; post source decay;
D O I
10.1023/A:1026320318489
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A combination of techniques is presented allowing gel-purified protein identification in the femtomole range using matrix-assisted-laser-desorption-ionization mass spectrometry. The proteins are detected in the primary gel by a sensitive negative staining procedure, transferred, and concentrated in a secondary gel matrix, There, they are digested in the presence of (H2O)-O-18 and their sequences are predicted (1) by peptide mass fingerprinting, (2) by comparing the post-source-decay (PSD) spectra with theoretical spectra of candidate isobaric peptides using a computer algorithm called MassFrag, and (3) by a manual readout of the O-18/O-16-labeled fragmentation ions in the PSD spectra.
引用
收藏
页码:335 / 342
页数:8
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