Ribosome Composition Maximizes Cellular Growth Rates in E. coli

被引:18
|
作者
Kostinski, Sarah [1 ]
Reuveni, Shlomi [1 ,2 ]
机构
[1] Tel Aviv Univ, Ctr Phys & Chem Living Syst, Sch Chem, IL-6997801 Tel Aviv, Israel
[2] Tel Aviv Univ, Ratner Inst Single Mol Chem, Sackter Ctr Computat Mol & Mat Sci, IL-6997801 Tel Aviv, Israel
基金
以色列科学基金会;
关键词
MITOCHONDRIAL RIBOSOME; REPLICATION; TRANSLATION; BACTERIAL; DATABASE; LIMITS;
D O I
10.1103/PhysRevLett.125.028103
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Bacterial ribosomes are composed of one-third protein and two-thirds RNA by mass. The predominance of RNA is often attributed to a primordial RNA world, but why exactly two-thirds remains a long-standing mystery. Here we present a quantitative analysis, based on the kinetics of ribosome self-replication, demonstrating that the 1: 2 protein-to-RNA mass ratio uniquely maximizes cellular growth rates in E. coli. A previously unrecognized growth law, and an invariant of bacterial growth, also follow from our analysis. The growth law reveals that the ratio between the number of ribosomes and the number of polymerases making ribosomal RNA is proportional to the cellular doubling time. The invariant is conserved across growth conditions and specifies how key microscopic parameters in the cell, such as transcription and translation rates, are coupled to cellular physiology. Quantitative predictions from the growth law and invariant are shown to be in excellent agreement with E. coli data despite having no fitting parameters. Our analysis can be readily extended to other bacteria once data become available.
引用
收藏
页数:6
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