Update on the human and mouse lipocalin (LCN) gene family, including evidence the mouse Mup cluster is result of an "evolutionary bloom"

被引:60
作者
Charkoftaki, Georgia [1 ]
Wang, Yewei [1 ]
McAndrews, Monica [2 ]
Bruford, Elspeth A. [3 ]
Thompson, David C. [4 ]
Vasiliou, Vasilis [1 ]
Nebert, Daniel W. [5 ,6 ,7 ]
机构
[1] Yale Univ, Dept Environm Hlth Sci, Yale Sch Publ Hlth, New Haven, CT 06520 USA
[2] Jackson Lab, Mouse Genome Informat, 600 Main St, Bar Harbor, ME 04609 USA
[3] European Bioinformat Inst, HUGO Gene Nomenclature Comm, Wellcome Genome Campus, Cambridge CB10 1SD, England
[4] Univ Colorado, Dept Clin Pharm, Skaggs Sch Pharm & Pharmaceut Sci, Aurora, CO USA
[5] Univ Cincinnati, Med Ctr, Dept Environm Hlth, Cincinnati, OH 45267 USA
[6] Univ Cincinnati, Med Ctr, Ctr Environm Genet, Cincinnati, OH 45267 USA
[7] Univ Cincinnati, Med Ctr, Dept Pediat & Mol & Dev Biol, Cincinnati Childrens Res Ctr, Cincinnati, OH 45267 USA
关键词
MAJOR URINARY PROTEINS; RETINOL-BINDING-PROTEIN; FATTY LIVER-DISEASE; SERUM RETINOL-BINDING-PROTEIN-4; INSULIN-RESISTANCE; PHEROMONE BINDING; ALPHA-1-ACID GLYCOPROTEIN; DIFFERENTIAL EXPRESSION; OXIDATIVE STRESS; LEVELS PREDICT;
D O I
10.1186/s40246-019-0191-9
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Lipocalins (LCNs) are members of a family of evolutionarily conserved genes present in all kingdoms of life. There are 19 LCN-like genes in the human genome, and 45 Lcn-like genes in the mouse genome, which include 22 major urinary protein (Mup) genes. The Mup genes, plus 29 of 30 Mup-ps pseudogenes, are all located together on chromosome (Chr) 4; evidence points to an evolutionary bloom that resulted in this Mup cluster in mouse, syntenic to the human Chr 9q32 locus at which a single MUPP pseudogene is located. LCNs play important roles in physiological processes by binding and transporting small hydrophobic molecules such as steroid hormones, odorants, retinoids, and lipidsin plasma and other body fluids. LCNs are extensively used in clinical practice as biochemical markers. LCN-like proteins (18-40kDa) have the characteristic eight -strands creating a barrel structure that houses the binding-site; LCNs are synthesized in the liver as well as various secretory tissues. In rodents, MUPs are involved in communication of information in urine-derived scent marks, serving as signatures of individual identity, or as kairomones (to elicit fear behavior). MUPs also participate in regulation of glucose and lipid metabolism via a mechanism not well understood. Although much has been learned about LCNs and MUPs in recent years, more research is necessary to allow better understanding of their physiological functions, as well as their involvement in clinical disorders.
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