Automated, high-throughput derivation, characterization and differentiation of induced pluripotent stem cells

被引:0
作者
Paull, Daniel [1 ]
Sevilla, Ana [1 ]
Zhou, Hongyan [1 ]
Hahn, Aana Kim [1 ]
Kim, Hesed [1 ]
Napolitano, Christopher [1 ]
Tsankov, Alexander [2 ,3 ,4 ]
Shang, Linshan [1 ]
Krumholz, Katie [1 ]
Jagadeesan, Premlatha [1 ]
Woodard, Chris M. [1 ]
Sun, Bruce [1 ]
Vilboux, Thierry [5 ,6 ]
Zimmer, Matthew [1 ]
Forero, Eliana [1 ]
Moroziewicz, Dorota N. [1 ]
Martinez, Hector [1 ]
Malicdan, May Christine V. [5 ]
Weiss, Keren A. [1 ]
Vensand, Lauren B. [1 ]
Dusenberry, Carmen R. [1 ]
Polus, Hannah [1 ]
Sy, Karla Therese L. [1 ]
Kahler, David J. [1 ]
Gahl, William A. [5 ,7 ,8 ]
Solomon, Susan L. [1 ]
Chang, Stephen [1 ]
Meissner, Alexander [2 ,3 ,4 ]
Eggan, Kevin [2 ,3 ,4 ,9 ]
Noggle, Scott A. [1 ]
机构
[1] New York Stem Cell Fdn Res Inst, New York, NY 10023 USA
[2] Broad Inst, Cambridge, MA USA
[3] Harvard Univ, Harvard Stem Cell Inst, Cambridge, MA 02138 USA
[4] Harvard Univ, Dept Stem Cell & Regenerat Biol, Cambridge, MA 02138 USA
[5] NHGRI, Sect Human Biochem Genet, Med Genet Branch, NIH, Bethesda, MD 20892 USA
[6] Inova Hlth Syst, Inova Translat Med Inst, Div Med Genom, Falls Church, VA USA
[7] NIH, NIH Undiagnosed Dis Program, Common Fund, Off Director, Bethesda, MD 20892 USA
[8] NHGRI, NIH, Bethesda, MD 20892 USA
[9] Howard Hughes Med Inst, Cambridge, MA USA
基金
美国国家卫生研究院;
关键词
EFFICIENT GENERATION; IPSC; MAINTENANCE; INDUCTION; EXPANSION; PLATFORM; EROSION; CULTURE;
D O I
10.1038/NMETH.3507
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Induced pluripotent stem cells (iPSCSCs) are an essential tool for modeling how causal genetic variants impact cellular function in disease, as well as an emerging source of tissue for regenerative medicine. The preparation of somatic cells, their reprogramming and the subsequent verification of iPSCSC pluripotency are laborious, manual processes limiting the scale and reproducibility of this technology. Here we describe a modular, robotic platform for iPSCSC reprogramming enabling automated, high-throughput conversion of skin biopsies into iPSCSCs and differentiated cells with minimal manual intervention. We demonstrate that automated reprogramming and the pooled selection of polyclonal pluripotent cells results in high-quality, stable iPSCSCs. These lines display less line-to-line variation than either manually produced lines or lines produced through automation followed by single-colony subcloning. The robotic platform we describe will enable the application of iPSCSCs to population-scale biomedical problems including the study of complex genetic diseases and the development of personalized medicines.
引用
收藏
页码:885 / +
页数:13
相关论文
共 41 条
[1]   Somatic copy number mosaicism in human skin revealed by induced pluripotent stem cells [J].
Abyzov, Alexej ;
Mariani, Jessica ;
Palejev, Dean ;
Zhang, Ying ;
Haney, Michael Seamus ;
Tomasini, Livia ;
Ferrandino, Anthony F. ;
Belmaker, Lior A. Rosenberg ;
Szekely, Anna ;
Wilson, Michael ;
Kocabas, Arif ;
Calixto, Nathaniel E. ;
Grigorenko, Elena L. ;
Huttner, Anita ;
Chawarska, Katarzyna ;
Weissman, Sherman ;
Urban, Alexander Eckehart ;
Gerstein, Mark ;
Vaccarino, Flora M. .
NATURE, 2012, 492 (7429) :438-+
[2]  
[Anonymous], 2012, R LANG ENV STAT COMP
[3]   A cost-effective and efficient reprogramming platform for large-scale production of integration-free human induced pluripotent stem cells in chemically defined culture [J].
Beers, Jeanette ;
Linask, Kaari L. ;
Chen, Jane A. ;
Siniscalchi, Lauren I. ;
Lin, Yongshun ;
Zheng, Wei ;
Rao, Mahendra ;
Chen, Guokai .
SCIENTIFIC REPORTS, 2015, 5
[4]   Reference Maps of Human ES and iPS Cell Variation Enable High-Throughput Characterization of Pluripotent Cell Lines [J].
Bock, Christoph ;
Kiskinis, Evangelos ;
Verstappen, Griet ;
Gu, Hongcang ;
Boulting, Gabriella ;
Smith, Zachary D. ;
Ziller, Michael ;
Croft, Gist F. ;
Amoroso, Mackenzie W. ;
Oakley, Derek H. ;
Gnirke, Andreas ;
Eggan, Kevin ;
Meissner, Alexander .
CELL, 2011, 144 (03) :439-452
[5]   Origins and implications of pluripotent stem cell variability and heterogeneity [J].
Cahan, Patrick ;
Daley, George Q. .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2013, 14 (06) :357-368
[6]   Reprogramming Factor Stoichiometry Influences the Epigenetic State and Biological Properties of Induced Pluripotent Stem Cells [J].
Carey, Bryce W. ;
Markoulaki, Styliani ;
Hanna, Jacob H. ;
Faddah, Dina A. ;
Buganim, Yosef ;
Kim, Jongpil ;
Ganz, Kibibi ;
Steine, Eveline J. ;
Cassady, John P. ;
Creyghton, Menno P. ;
Welstead, G. Grant ;
Gao, Qing ;
Jaenisch, Rudolf .
CELL STEM CELL, 2011, 9 (06) :588-598
[7]   Human Pluripotent Stem Cell Culture: Considerations for Maintenance, Expansion, and Therapeutics [J].
Chen, Kevin G. ;
Mallon, Barbara S. ;
McKay, Ronald D. G. ;
Robey, Pamela G. .
CELL STEM CELL, 2014, 14 (01) :13-26
[8]   Low Incidence of DNA Sequence Variation in Human Induced Pluripotent Stem Cells Generated by Nonintegrating Plasmid Expression [J].
Cheng, Linzhao ;
Hansen, Nancy F. ;
Zhao, Ling ;
Du, Yutao ;
Zou, Chunlin ;
Donovan, Frank X. ;
Chou, Bin-Kuan ;
Zhou, Guangyu ;
Li, Shijie ;
Dowey, Sarah N. ;
Ye, Zhaohui ;
Chandrasekharappa, Settara C. ;
Yang, Huanming ;
Mullikin, James C. ;
Liu, P. Paul .
CELL STEM CELL, 2012, 10 (03) :337-344
[9]   Pluripotent Stem Cells and Disease Modeling [J].
Colman, Alan ;
Dreesen, Oliver .
CELL STEM CELL, 2009, 5 (03) :244-247
[10]   Scalable 96-well Plate Based iPSC Culture and Production Using a Robotic Liquid Handling System [J].
Conway, Michael K. ;
Gerger, Michael J. ;
Balay, Erin E. ;
O'Connell, Rachel ;
Hanson, Seth ;
Daily, Neil J. ;
Wakatsuki, Tetsuro .
JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2015, (99)