Exoproteome and Secretome Derived Broad Spectrum Novel Drug and Vaccine Candidates in Vibrio cholerae Targeted by Piper betel Derived Compounds

被引:102
作者
Barh, Debmalya [1 ,2 ]
Barve, Neha [1 ,3 ]
Gupta, Krishnakant [1 ,3 ]
Chandra, Sudha [1 ,3 ]
Jain, Neha [1 ]
Tiwari, Sandeep [1 ]
Leon-Sicairos, Nidia [4 ]
Canizalez-Roman, Adrian [4 ]
dos Santos, Anderson Rodrigues [5 ]
Hassan, Syed Shah [5 ]
Almeida, Sintia [5 ]
Juca Ramos, Rommel Thiago [6 ]
Carvalho de Abreu, Vinicius Augusto [5 ]
Carneiro, Adriana Ribeiro [6 ]
Soares, Siomar de Castro [5 ]
de Paula Castro, Thiago Luiz [5 ]
Miyoshi, Anderson [5 ]
Silva, Artur [6 ]
Kumar, Anil [3 ]
Misra, Amarendra Narayan [2 ,7 ]
Blum, Kenneth [1 ,8 ,9 ]
Braverman, Eric R. [10 ]
Azevedo, Vasco [5 ]
机构
[1] IIOAB, Ctr Genom & Appl Gene Technol, Purba Medinipur, W Bengal, India
[2] Fakir Mohan Univ, Sch Biotechnol, Dept Biosci & Biotechnol, Balasore, Orissa, India
[3] Devi Ahilya Univ, Sch Biotechnol, Indore, Madhya Pradesh, India
[4] Autonomous Univ Sinaloa, Sch Med, Unit Res, Fracc Fresnos, Culiacan, Mexico
[5] Univ Fed Minas Gerais, Inst Ciencias Biol, Dept Biol Geral, Lab Genet Celular & Mol, Belo Horizonte, MG, Brazil
[6] Fed Univ Para, Inst Ciencias Biol, BR-66059 Belem, Para, Brazil
[7] Cent Univ Jharkhand, Sch Nat Sci, Ctr Life Sci, Ranchi, Jharkhand State, India
[8] Univ Florida, Coll Med, Gainesville, FL USA
[9] Univ Vermont, Coll Med, Ctr Clin & Translat Sci, Burlington, VT USA
[10] Cornell Univ, Weill Cornell Coll Med, New York, NY 10021 USA
关键词
SUBCELLULAR-LOCALIZATION; PROTEIN-STRUCTURE; ESSENTIAL GENES; TDR TARGETS; PREDICTION; IDENTIFICATION; BETLE; DATABASE; EXTRACT; PATHOGEN;
D O I
10.1371/journal.pone.0052773
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Vibrio cholerae is the causal organism of the cholera epidemic, which is mostly prevalent in developing and underdeveloped countries. However, incidences of cholera in developed countries are also alarming. Because of the emergence of new drug-resistant strains, even though several generic drugs and vaccines have been developed over time, Vibrio infections remain a global health problem that appeals for the development of novel drugs and vaccines against the pathogen. Here, applying comparative proteomic and reverse vaccinology approaches to the exoproteome and secretome of the pathogen, we have identified three candidate targets (ompU, uppP and yajC) for most of the pathogenic Vibrio strains. Two targets (uppP and yajC) are novel to Vibrio, and two targets (uppP and ompU) can be used to develop both drugs and vaccines (dual targets) against broad spectrum Vibrio serotypes. Using our novel computational approach, we have identified three peptide vaccine candidates that have high potential to induce both B-and T-cell-mediated immune responses from our identified two dual targets. These two targets were modeled and subjected to virtual screening against natural compounds derived from Piper betel. Seven compounds were identified first time from Piper betel to be highly effective to render the function of these targets to identify them as emerging potential drugs against Vibrio. Our preliminary validation suggests that these identified peptide vaccines and betel compounds are highly effective against Vibrio cholerae. Currently we are exhaustively validating these targets, candidate peptide vaccines, and betel derived lead compounds against a number of Vibrio species.
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页数:10
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