The enhancement of stability of p53 in MTBP induced p53-MDM2 regulatory network
被引:13
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作者:
Alam, Md. Jahoor
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Alam, Md. Jahoor
[1
]
Fatima, Nishat
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Fatima, Nishat
[1
]
Devi, Gurumayum Reenaroy
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Devi, Gurumayum Reenaroy
[1
]
Ravins
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Ravins
[1
]
Singh, R. K. Brojen
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Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, IndiaJamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Singh, R. K. Brojen
[1
]
机构:
[1] Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
Unstable and stable states;
Limit cycle;
Fix point oscillation;
Noise parameters;
Steady state solutions;
STOCHASTIC SIMULATION;
G(1) ARREST;
MDM2;
PROTEIN;
APOPTOSIS;
CELLS;
D O I:
10.1016/j.biosystems.2012.09.005
中图分类号:
Q [生物科学];
学科分类号:
07 ;
0710 ;
09 ;
摘要:
We have modeled an MTBP-MDM2-p53 regulatory network by integrating p53-MDM2 autoregulatory model (Proctor and Gray, 2008) with the effect of a cellular protein MTBP (MDM2 binding protein) which is allowed to bind with MDM2 (Brady et al., 2005). We study this model to investigate the activation of p53 and MDM2 steady state levels induced by MTBP protein under different stress conditions. Our simulation results in three approaches namely deterministic, Chemical Langevin equation and stochastic simulation of Master equation show a clear transition from damped limit cycle oscillation to fixed point oscillation during a certain time period with constant stress condition in the cell. This transition is the signature of transition of p53 and MDM2 levels from activated state to stabilized steady state levels. We present various phase diagrams to show the transition between unstable and stable states of p$3 and MDM2 concentration levels and also their possible relations among critical value of the parameters at which the respective protein level reach stable steady states. In the stochastic approach, the dynamics of the proteins become noise induced process depending on the system size. We found that this noise enhances the stability of the p53 steady state level. (C) 2012 Elsevier Ireland Ltd. All rights reserved.
机构:
Xuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R ChinaXuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
Qian, Fengyuan
Tang, Tianjin
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Xuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
First Peoples Hosp Xuzhou, Xuzhou, Jiangsu, Peoples R ChinaXuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
Tang, Tianjin
Wang, Shiquan
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Xuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R ChinaXuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
Wang, Shiquan
Wang, Bin
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Xuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R ChinaXuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
Wang, Bin
Wang, Lei
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Xuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R ChinaXuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
Wang, Lei
Shi, Hengliang
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Xuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
Xuzhou Med Univ, Cent Lab, Affiliated Hosp, Xuzhou, Jiangsu, Peoples R ChinaXuzhou Med Univ, Affiliated Hosp, Inst Nervous Syst Dis, Xuzhou, Jiangsu, Peoples R China
机构:
Beijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R ChinaBeijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R China
Liu, Bo
Yan, Shiwei
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Beijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R China
Beijing Radiat Ctr, Beijing 100875, Peoples R China
Natl Lab Heavy Ion Accelerator Lanzhou, Ctr Theoret Phys, Lanzhou 730000, Peoples R ChinaBeijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R China
Yan, Shiwei
Wang, Qi
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Beijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R ChinaBeijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R China
Wang, Qi
Liu, Shengjun
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Beijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R ChinaBeijing Normal Univ, Coll Nucl Sci & Technol, Beijing 100875, Peoples R China
机构:
Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Hiraki, Masatsugu
Hwang, So-Young
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Hwang, So-Young
Cao, Shugeng
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Univ Hawaii, Dept Pharmaceut Sci, Daniel K Inouye Coll Pharm, Hilo, HI 96720 USA
Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Cao, Shugeng
Ramadhar, Timothy R.
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Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Ramadhar, Timothy R.
Byun, Sanguine
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Byun, Sanguine
Yoon, Kyoung Wan
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Yoon, Kyoung Wan
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Lee, Jung Hyun
Chu, Kiki
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Chu, Kiki
Gurkar, Aditi U.
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Gurkar, Aditi U.
Kolev, Vihren
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Kolev, Vihren
Zhang, Jianming
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Zhang, Jianming
Namba, Takushi
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Namba, Takushi
Murphy, Maureen E.
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Wistar Inst Anat & Biol, Program Mol & Cellular Oncogenesis, Philadelphia, PA 19104 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Murphy, Maureen E.
Newman, David J.
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Frederick Natl Lab Canc Res, Nat Prod Branch, Dev Therapeut Program, Div Canc Treatment & Diag, Frederick, MD 21702 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Newman, David J.
Mandinova, Anna
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USA
Broad Inst Harvard & MIT, Cambridge, MA 02142 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Mandinova, Anna
Clardy, Jon
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Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Clardy, Jon
Lee, Sam W.
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Massachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
Harvard Univ, Sch Med, Charlestown, MA 02129 USA
Broad Inst Harvard & MIT, Cambridge, MA 02142 USAMassachusetts Gen Hosp, Cutaneous Biol Res Ctr, Charlestown, MA 02129 USA
机构:
Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Zhejiang Agr & Forestry Univ, Forestry & Biotechnol Sch, Hangzhou 311300, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Wang, Xiaodu
Deng, Xufang
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Deng, Xufang
Yan, Wenjun
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Yan, Wenjun
Zhu, Zixiang
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Zhu, Zixiang
Shen, Yang
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Shen, Yang
Qiu, Yafeng
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Qiu, Yafeng
Shi, Zixue
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Shi, Zixue
Shao, Donghua
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Shao, Donghua
Wei, Jianchao
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Wei, Jianchao
Xia, Xianzhu
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Acad Mil Med Sci, Inst Vet Sci, Changchun 130062, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China
Xia, Xianzhu
Ma, Zhiyong
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Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R ChinaChinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China