Rapid identification by MALDI-TOF/MS and antimicrobial disk diffusion susceptibility testing for positive blood cultures after a short incubation on the WASPLab

被引:16
作者
Cherkaoui, Abdessalam [1 ]
Renzi, Gesuele [1 ]
Azam, Nouria [1 ]
Schorderet, Didier [1 ]
Vuilleumier, Nicolas [2 ,3 ]
Schrenzel, Jacques [1 ,4 ,5 ]
机构
[1] Geneva Univ Hosp, Dept Diagnost, Div Lab Med, Bacteriol Lab, 4 Rue Gabrielle Perret Gentil, CH-1205 Geneva, Switzerland
[2] Geneva Univ Hosp, Div Lab Med, Dept Diagnost, Geneva, Switzerland
[3] Fac Med, Div Lab Med, Dept Med Special, Geneva, Switzerland
[4] Geneva Univ Hosp, Div Infect Dis, Genom Res Lab, Dept Med, Geneva, Switzerland
[5] Fac Med, Geneva, Switzerland
关键词
Copan WASPLab; MALDI-TOF/MS; Short subcultures; AST by disk diffusion; Automation; Accuracy; Turn-around time; FLIGHT MASS-SPECTROMETRY; DESORPTION IONIZATION-TIME; BACTERIA; SURVIVAL; SEPSIS; ANTIBIOTICS; BOTTLES; THERAPY; MS;
D O I
10.1007/s10096-020-03817-8
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
The objectives of this study were to define the shortest incubation times on the WASPLab for reliable MALDI-TOF/MS-based species identification and for the preparation of a 0.5 McFarland suspension for antimicrobial disk diffusion susceptibility testing using short subcultures growing on solid culture media inoculated by positive blood cultures spiked with a wide range of pathogens associated with bloodstream infections. The 520 clinical strains (20 x 26 different species) included in this study were obtained from a collection of non-consecutive and non-duplicate pathogens identified at Geneva University Hospitals. After 4 h of incubation on the WASPLab, microorganisms' growth allowed accurate identification of 73% (380/520) (95% CI, 69.1-76.7%) of the strains included in this study. The identification rate increased to 85%(440/520) (95% CI, 81.3-87.5%) after 6-h incubation. When excluding Corynebacterium and Candida spp., the microbial growth was sufficient to permit accurate identification of all tested species (100%, 460/460) (95% CI, 99.2-100%) after 8-h incubation. With the exception of Burkholderia cepacia and Haemophilus influenzae, AST by disk diffusion could be performed for Enterobacterales and non-fermenting Gram-negative bacilli after only 4 h of growth in the WASPLab. The preparation of a 0.5 Mc Farland suspension for Gram-positive bacteria required incubation times ranging between 3 and 8 h according to the bacterial species. Only Corynebacterium spp. required incubation times as long as 16 h. The WASP Lab enables rapid pathogen identification as well as swift comprehensive AST from positive blood cultures that can be implemented without additional costs nor hands-on time by defining optimal time points for image acquisition.
引用
收藏
页码:1063 / 1070
页数:8
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