Glutamate racemase as a target for drug discovery

被引:75
作者
Fisher, Stewart L. [1 ]
机构
[1] AstraZeneca R&D Boston, Waltham, MA 02451 USA
关键词
D O I
10.1111/j.1751-7915.2008.00031.x
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The bacterial cell wall is a highly cross-linked polymeric structure consisting of repeating peptidoglycan units, each of which contains a novel pentapeptide substitution which is cross-linked through transpeptidation. The incorporation of D-glutamate as the second residue is strictly conserved across the bacterial kingdom. Glutamate racemase, a member of the cofactor-independent, two-thiol-based family of amino acid racemases, has been implicated in the production and maintenance of sufficient D-glutamate pool levels required for growth. The subject of over four decades of research, it is now evident that the enzyme is conserved and essential for growth across the bacterial kingdom and has a conserved overall topology and active site architecture; however, several different mechanisms of regulation have been observed. These traits have recently been targeted in the discovery of both narrow and broad spectrum inhibitors. This review outlines the biological history of this enzyme, the recent biochemical and structural characterization of isozymes from a wide range of species and developments in the identification of inhibitors that target the enzyme as possible therapeutic agents.
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页码:345 / 360
页数:16
相关论文
共 95 条
[41]  
Hwang KY, 1999, NAT STRUCT BIOL, V6, P422
[42]   Glr, a glutamate racemase, supplies D-glutamate to both peptidoglycan synthesis and poly-γ-glutamate production in γ-PGA-producing Bacillus subtilis [J].
Kada, S ;
Nanamiya, H ;
Kawamura, F ;
Horinouchi, S .
FEMS MICROBIOLOGY LETTERS, 2004, 236 (01) :13-20
[43]   Structure-based design approaches to cell wall biosynthesis inhibitors [J].
Katz, AH ;
Caufield, CE .
CURRENT PHARMACEUTICAL DESIGN, 2003, 9 (11) :857-866
[44]  
KEATING TA, 2006, 46 ICAAC M SAN FRANC
[45]   Structural basis for glutamate racemase inhibition [J].
Kim, Kook-Han ;
Bong, Young-Jong ;
Park, Joon Kyu ;
Shin, Key-Jung ;
Hwang, Kwang Yeon ;
Kim, Eunice EunKyeong .
JOURNAL OF MOLECULAR BIOLOGY, 2007, 372 (02) :434-443
[46]   Molecular cloning, expression, and characterization of a thermostable glutamate racemase from a hyperthermophilic bacterium, Aquifex pyrophilus [J].
Kim, SS ;
Choi, IG ;
Kim, SH ;
Yu, YG .
EXTREMOPHILES, 1999, 3 (03) :175-183
[47]   Isolation of peptide ligands that inhibit glutamate racemase activity from a random phage display library [J].
Kim, WC ;
Rhee, HI ;
Park, BK ;
Suk, KH ;
Cha, SH .
JOURNAL OF BIOMOLECULAR SCREENING, 2000, 5 (06) :435-440
[48]   Roles and regulation of the glutamate racemase isogenes, racE and yrpC, in Bacillus subtilis [J].
Kimura, K ;
Tran, LSP ;
Itoh, Y .
MICROBIOLOGY-SGM, 2004, 150 :2911-2920
[49]   Invasive methicillin-resistant Staphylococcus aureus infections in the United States [J].
Klevens, R. Monina ;
Morrison, Melissa A. ;
Nadle, Joelle ;
Petit, Susan ;
Gershman, Ken ;
Ray, Susan ;
Harrison, Lee H. ;
Lynfield, Ruth ;
Dumyati, Ghinwa ;
Townes, John M. ;
Craig, Allen S. ;
Zell, Elizabeth R. ;
Fosheim, Gregory E. ;
McDougal, Linda K. ;
Carey, Roberta B. ;
Fridkin, Scott K. .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2007, 298 (15) :1763-1771
[50]   A common mechanism of cellular death induced by bactericidal antibiotics [J].
Kohanski, Michael A. ;
Dwyer, Daniel J. ;
Hayete, Boris ;
Lawrence, Carolyn A. ;
Collins, James J. .
CELL, 2007, 130 (05) :797-810