Development of a risk scoring system for patients with papillary thyroid cancer

被引:12
作者
Pak, Kyoungjune [1 ,2 ]
Kim, Yun Hak [2 ,3 ,4 ]
Suh, Sunghwan [5 ]
Goh, Tae Sik [2 ,6 ]
Jeong, Dae Cheon [7 ]
Kim, Seong Jang [8 ,9 ]
Kim, In Joo [1 ,2 ]
Han, Myoung-Eun [3 ]
Oh, Sae-Ock [3 ]
机构
[1] Pusan Natl Univ Hosp, Dept Nucl Med, Busan, South Korea
[2] Pusan Natl Univ Hosp, Biomed Res Inst, Busan, South Korea
[3] Pusan Natl Univ, Sch Med, Dept Anat, Yangsan, South Korea
[4] Pusan Natl Univ, Sch Med, Dept Biomed Informat, Yangsan, South Korea
[5] Dong A Univ, Dept Internal Med, Coll Med, Busan, South Korea
[6] Pusan Natl Univ Hosp, Dept Orthopaed Surg, Busan, South Korea
[7] Deloitte Consulting LLC, Deloitte Analyt Grp, Seoul, South Korea
[8] Pusan Natl Univ, Yangsan Hosp, Dept Nucl Med, Yangsan, South Korea
[9] Pusan Natl Univ, Yangsan Hosp, Res Inst Convergence Biomed Sci & Technol, Yangsan, South Korea
基金
新加坡国家研究基金会;
关键词
network-regularized high dimensional cox regression; papillary thyroid cancer; pathway databases; prognosis; TCGA; DIMENSIONAL COX REGRESSION; DISTANT METASTASES; PROGNOSTIC VALUE; CARCINOMA; SURVIVAL; ASSOCIATION; STATISTICS; EXPRESSION; PREDICTION; SIGNATURE;
D O I
10.1111/jcmm.14208
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
As the importance of personalized therapeutics in aggressive papillary thyroid cancer (PTC) increases, accurate risk stratification is required. To develop a novel prognostic scoring system for patients with PTC (n = 455), we used mRNA expression and clinical data from The Cancer Genome Atlas. We performed variable selection using Network-Regularized high-dimensional Cox-regression with gene network from pathway databases. The risk score was calculated using a linear combination of regression coefficients and mRNA expressions. The risk score and clinical variables were assessed by several survival analyses. The risk score showed high discriminatory power for the prediction of event-free survival as well as the presence of metastasis. In multivariate analysis, the risk score and presence of metastasis were significant risk factors among the clinical variables that were examined together. In the current study, we developed a risk scoring system that will help to identify suitable therapeutic options for PTC.
引用
收藏
页码:3010 / 3015
页数:6
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