Identification of nuclear localization signal and nuclear export signal of VP1 from the chicken anemia virus and effects on VP2 shuttling in cells

被引:22
作者
Cheng, Jai-Hong [1 ,2 ]
Lai, Guan-Hua [3 ]
Lien, Yi-Yang [4 ,5 ]
Sun, Fang-Chun [6 ]
Hsu, Shan-Ling [2 ,7 ,8 ]
Chuang, Pei-Chin [1 ,2 ]
Lee, Meng-Shiou [9 ]
机构
[1] Kaohsiung Chang Gung Mem Hosp, Ctr Shockwave Med & Tissue Engn, Dept Med Res, 123 Tai Pei Rd, Kaohsiung 833, Taiwan
[2] Chang Gung Univ, Coll Med, 123 Tai Pei Rd, Kaohsiung 833, Taiwan
[3] Natl Chung Hsing Univ, Grad Inst Biotechnol, Coll Agr & Nat Resources, Taichung 40402, Taiwan
[4] Natl Pingtung Univ Sci & Technol, Dept Vet Med, Pingtung, Taiwan
[5] Natl Pingtung Univ Sci & Technol, Res Ctr Anim Biol, Pingtung, Taiwan
[6] Da Yeh Univ, Dept Bioresources, Changhua, Taiwan
[7] Kaohsiung Chang Gung Mem Hosp, Dept Orthoped Surg, Ctr Shockwave Med & Tissue Engn, Kaohsiung, Taiwan
[8] Fooyin Univ, Sch Nursing, Kaohsiung, Taiwan
[9] China Med Univ, Dept Chinese Pharmaceut Sci & Chinese Med Resourc, 91 Hsueh Shih Rd, Taichung, Taiwan
关键词
Chicken anemia virus; VP1; VP2; Nuclear localization signal; Nuclear export signal; CRM1-dependent pathway; INFLUENZA-A VIRUS; PROTEIN; APOPTIN; AGENT; EXPRESSION; ALIGNMENT; DNAS;
D O I
10.1186/s12985-019-1153-5
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
BackgroundVP1 of the chicken anemia virus (CAV) is a structural protein that is required for virus encapsulation. VP1 proteins are present both in the nucleus and cytoplasm; however, the functional nuclear localization signal (NLS) and nuclear export signal (NES) of VP1 are still unknown. This study aimed to characterize the NLS and NES motifs of VP1 using bioinformatics methods and multiple-site fragment deletions, and investigate shuttling of VP2 from nucleus to cytoplasm by co-transfection with VP1.MethodsTwo putative NLS motifs were predicted by the WoLF PSORT and NLStradamus programs from the amino acid sequence of VP1. Three NES motifs of VP1 were predicted by the NetNES 1.1 Server and ELM server programs. All mutants were created by multiple-site fragment deletion mutagenesis. VP1 and VP2 were co-expressed in cells using plasmid transfection.ResultsA functional NLS motif was identified at amino acid residues 3 to 10 (RRARRPRG) of VP1. Critical amino acids 3 to 10 were significantly involved in nuclear import in cells and were evaluated using systematic deletion mutagenesis. Three NES motifs of VP1 were predicted by the NetNES 1.1 Server and ELM server programs. A functional NES was identified at amino acid residues 375 to 388 (ELDTNFFTLYVAQ). Leptomycin B (LMB) treatment demonstrated that VP1 export from nucleus to cytoplasm occurred through a chromosome region maintenance 1 (CRM1)-dependent pathway. With co-expression of VP1 and VP2 in cells, we observed that VP1 may transport VP2 from nucleus to cytoplasm.ConclusionOur data showed that VP1 of CAV contained functional NLS and NES motifs that modulated nuclear import and export through a CRM1-dependent pathway. Further, VP1 may play a role in the transport of VP2 from nucleus to cytoplasm.
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页数:9
相关论文
共 44 条
[1]   NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction [J].
Ba, Alex N. Nguyen ;
Pogoutse, Anastassia ;
Provart, Nicholas ;
Moses, Alan M. .
BMC BIOINFORMATICS, 2009, 10
[2]   The export receptor Crm1 forms a dimer to promote nuclear export of HIV RNA [J].
Booth, David S. ;
Cheng, Yifan ;
Frankel, Alan D. .
ELIFE, 2014, 3 :e04121
[3]   MView: a web-compatible database search or multiple alignment viewer [J].
Brown, NP ;
Leroy, C ;
Sander, C .
BIOINFORMATICS, 1998, 14 (04) :380-381
[4]   A Nuclear Export Signal in the Matrix Protein of Influenza A Virus Is Required for Efficient Virus Replication [J].
Cao, Shuai ;
Liu, Xiaoling ;
Yu, Maorong ;
Li, Jing ;
Jia, Xiaojuan ;
Bi, Yuhai ;
Sun, Lei ;
Gao, George F. ;
Liu, Wenjun .
JOURNAL OF VIROLOGY, 2012, 86 (09) :4883-4891
[5]   Identification of the NLS and NES motifs of VP2 from chicken anemia virus and the interaction of VP2 with mini-chromosome maintenance protein 3 [J].
Cheng, Jai-Hong ;
Sheu, Shyang-Chwen ;
Lien, Yi-Yang ;
Lee, Meng-Shiunn ;
Chen, His-Jien ;
Su, Wen-Hong ;
Lee, Meng-Shiou .
BMC VETERINARY RESEARCH, 2012, 8
[6]   THE HIV-1 REV ACTIVATION DOMAIN IS A NUCLEAR EXPORT SIGNAL THAT ACCESSES AN EXPORT PATHWAY USED BY SPECIFIC CELLULAR RNAS [J].
FISCHER, U ;
HUBER, J ;
BOELENS, WC ;
MATTAJ, IW ;
LUHRMANN, R .
CELL, 1995, 82 (03) :475-483
[7]   Nuclear import and cell cycle arrest functions of the HIV-1 Vpr protein are encoded by two separate genes in HIV-2/SIVSM [J].
Fletcher, TM ;
Brichacek, B ;
Sharova, N ;
Newman, MA ;
Stivahtis, G ;
Sharp, PM ;
Emerman, M ;
Hahn, BH ;
Stevenson, M .
EMBO JOURNAL, 1996, 15 (22) :6155-6165
[8]   ELM: the status of the 2010 eukaryotic linear motif resource [J].
Gould, Cathryn M. ;
Diella, Francesca ;
Via, Allegra ;
Puntervoll, Pal ;
Gemuend, Christine ;
Chabanis-Davidson, Sophie ;
Michael, Sushama ;
Sayadi, Ahmed ;
Bryne, Jan Christian ;
Chica, Claudia ;
Seiler, Markus ;
Davey, Norman E. ;
Haslam, Niall ;
Weatheritt, Robert J. ;
Budd, Aidan ;
Hughes, Tim ;
Pas, Jakub ;
Rychlewski, Leszek ;
Trave, Gilles ;
Aasland, Rein ;
Helmer-Citterich, Manuela ;
Linding, Rune ;
Gibson, Toby J. .
NUCLEIC ACIDS RESEARCH, 2010, 38 :D167-D180
[9]   The role of the adenovirus protease in virus entry into cells [J].
Greber, UF ;
Webster, P ;
Weber, J ;
Helenius, A .
EMBO JOURNAL, 1996, 15 (08) :1766-1777
[10]   Apoptin nucleocytoplasmic shuttling is required for cell type-specific localization, apoptosis, and recruitment of the anaphase-promoting complex/cyclosome to PML bodies [J].
Heilman, Destin W. ;
Teodoro, Jose G. ;
Green, Michael R. .
JOURNAL OF VIROLOGY, 2006, 80 (15) :7535-7545