A Beginner's Guide to Phylogenetics

被引：13
作者：
Sleator, Roy D. [1 ]
机构：
[1] Cork Inst Technol, Dept Biol Sci, Cork, Ireland
来源：
MICROBIAL ECOLOGY | 2013年 / 66卷 / 01期
关键词：
MOLECULAR SEQUENCES; PHYLOGENOMICS; TREE; ALGORITHMS; BACTERIA;
D O I：
10.1007/s00248-013-0236-x
中图分类号：
Q14 [生态学（生物生态学）];
学科分类号：
071012 ; 0713 ;
摘要：
Metagenomics and the development of high throughput next generation sequencing capabilities have forced significant development in the field of phylogenetics: the study of the evolutionary relatedness of the planet's inhabitants. Herein, I review the major tree-building strategies, challenges and opportunities which exist in this rapidly expanding field of evolutionary biology.
引用
收藏
页码：1 / 4
页数：4
相关论文
共 50 条
  • [21] Editorial: Monocot phylogenetics and trait evolution
    Remizowa, Margarita V.
    Graham, Sean W.
    Rudall, Paula J.
    FRONTIERS IN PLANT SCIENCE, 2022, 13
  • [22] Tanglegrams: A Reduction Tool for Mathematical Phylogenetics
    Matsen, Frederick A.
    Billey, Sara C.
    Kas, Arnold
    Konvalinka, Matjaz
    IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2018, 15 (01) : 343 - 349
  • [23] Multispecies Coalescent: Theory and Applications in Phylogenetics
    Mirarab, Siavash
    Nakhleh, Luay
    Warnow, Tandy
    ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 52, 2021, 2021, 52 : 247 - 268
  • [24] Phylogenetics: Bats United, Microbats Divided
    Springer, Mark S.
    CURRENT BIOLOGY, 2013, 23 (22) : R999 - R1001
  • [25] Primate molecular phylogenetics in a genomic era
    Ting, Nelson
    Sterner, Kirstin N.
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 66 (02) : 565 - 568
  • [26] HIV-1 Full-Genome Phylogenetics of Generalized Epidemics in Sub-Saharan Africa: Impact of Missing Nucleotide Characters in Next-Generation Sequences
    Ratmann, Oliver
    Wymant, Chris
    Colijn, Caroline
    Danaviah, Siva
    Essex, Max
    Frost, Simon
    Gall, Astrid
    Gaseitsiwe, Simani
    Grabowski, Mary K.
    Gray, Ronald
    Guindon, Stephane
    von Haeseler, Arndt
    Kaleebu, Pontiano
    Kendall, Michelle
    Kozlov, Alexey
    Manasa, Justen
    Minh, Bui Quang
    Moyo, Sikhulile
    Novitsky, Vlad
    Nsubuga, Rebecca
    Pillay, Sureshnee
    Quinn, Thomas C.
    Serwadda, David
    Ssemwanga, Deogratius
    Stamatakis, Alexandros
    Trifinopoulos, Jana
    Wawer, Maria
    Brown, Andy Leigh
    de Oliveira, Tulio
    Kellam, Paul
    Pillay, Deenan
    Fraser, Christophe
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 2017, 33 (11) : 1083 - 1098
  • [27] In silico Comparison of 19 Porphyromonas gingivalis Strains in Genomics, Phylogenetics, Phylogenomics and Functional Genomics
    Chen, Tsute
    Siddiqui, Huma
    Olsen, Ingar
    FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2017, 7
  • [28] A User's Guide to Metaphors In Ecology and Evolution
    Olson, Mark E.
    Arroyo-Santos, Alfonso
    Vergara-Silva, Francisco
    TRENDS IN ECOLOGY & EVOLUTION, 2019, 34 (07) : 605 - 615
  • [29] Bacterial growth: a statistical physicist's guide
    Allen, Rosalind J.
    Waclaw, Bartlomiej
    REPORTS ON PROGRESS IN PHYSICS, 2019, 82 (01)
  • [30] A Library Writer's Guide to Shortcut Fusion
    Harper, Thomas
    ACM SIGPLAN NOTICES, 2011, 46 (12) : 47 - 58
12345