Microbiome: diversity, distribution, and potential role in sustainable crop production

被引:0
作者
Fernando, W. G. D. [1 ]
Dolatabadian, A. [1 ]
机构
[1] Univ Manitoba, Dept Plant Sci, Winnipeg, MB R3T 2N2, Canada
来源
JOURNAL OF THE NATIONAL SCIENCE FOUNDATION OF SRI LANKA | 2022年 / 50卷
关键词
Crop improvement; genomics; microbiome; pathogen; sustainable agriculture; GROWTH-PROMOTING RHIZOBACTERIA; PLANT-GROWTH; ARABIDOPSIS-THALIANA; RHIZOSPHERE MICROBIOME; ACC DEAMINASE; ROOT MICROBIOTA; NITROGEN; PATTERNS; BACTERIA; MAIZE;
D O I
10.4038/jnsfsr.v50i0.11245
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
: From microbiomes in cheese to soil, many organisms provide enhancement, enrichment, production, and some degradation to the niche they occupy. Although microbial diversity and microbiomes have been known for centuries, it has become a trendy area to investigate with the advent of omics approaches where a vast amount of information can be gathered about the nature and befits of these microorganisms. This information is crucial given the world's population rise. According to FAO, feeding the world's 9.1 billion people in 2050 will necessitate a 70 percent increase in overall food production. Five steps have been offered to fulfil this increasing global food supply-demand, including decreasing agriculture's footprint, growing more on existing farms, discovering ways to use resources efficiently, modifying our diets, and reducing waste. It is essential to focus on management practices that influence soil health, sustainable productivity, and inorganic inputs to reduce agriculture's footprint. Conventional agriculture has increased agricultural production on a large scale; however, overuse of chemicals has led to food contamination, negative environmental consequences, and disease resistance, all of which have important implications for human health and food security. Microbiome research makes it possible to simultaneously reduce these environmental impacts and steadily increase the quantity and quality of agricultural products. Plant microbiome research focuses on defining the structure and activities of microbial communities in various plant-associated habitats and establishing a relationship between specific microbial taxa and plant performance. The microbes associated with plants in the plant microbiome can provide a variety of advantages, including plant growth promotion, soil fertility and control of pests and plant pathogens. Traditional approaches can only examine a small percentage of the vast unexplored soil microbial world because of their biased detection of microbial genetics and functional diversity through culture methods. Today, with the advent of high throughput sequencing techniques and a variety of "omics" approaches, researchers can now identify microbiome structure and dynamics along with host interactions on an extraordinary level. These approaches will be valuable in establishing the relationship between the structure and function of the soil microbial community and gaining a better understanding of environmental and ecological processes, with a focus on plant -microbe ecosystems.
引用
收藏
页码:231 / 250
页数:20
相关论文
共 201 条
  • [51] Gamalero E, 2011, BACTERIA IN AGROBIOLOGY: PLANT NUTRIENT MANAGEMENT, P17, DOI 10.1007/978-3-642-21061-7_2
  • [52] Disease-induced changes in plant microbiome assembly and functional adaptation
    Gao, Min
    Xiong, Chao
    Gao, Cheng
    Tsui, Clement K. M.
    Wang, Meng-Meng
    Zhou, Xin
    Zhang, Ai-Min
    Cai, Lei
    [J]. MICROBIOME, 2021, 9 (01)
  • [53] The volatile 6-pentyl-2H-pyran-2-one from Trichoderma atroviride regulates Arabidopsis thaliana root morphogenesis via auxin signaling and ETHYLENE INSENSITIVE 2 functioning
    Garnica-Vergara, Amira
    Barrera-Ortiz, Salvador
    Munoz-Parra, Edith
    Raya-Gonzalez, Javier
    Mendez-Bravo, Alejandro
    Macias-Rodriguez, Lourdes
    Francisco Ruiz-Herrera, Leon
    Lopez-Bucio, Jose
    [J]. NEW PHYTOLOGIST, 2016, 209 (04) : 1496 - 1512
  • [54] Taxonomic diversity of bacteria associated with the roots of modern, recent and ancient wheat cultivars
    Germida J.J.
    Siciliano S.D.
    [J]. Biology and Fertility of Soils, 2001, 33 (5) : 410 - 415
  • [55] Bacteria with ACC deaminase can promote plant growth and help to feed the world
    Glick, Bernard R.
    [J]. MICROBIOLOGICAL RESEARCH, 2014, 169 (01) : 30 - 39
  • [56] Drivers that establish and assembly the lactic acid bacteria biota in cheeses
    Gobbetti, Marco
    Di Cagno, Raffaella
    Calasso, Maria
    Neviani, Erasmo
    Fox, Patrick F.
    De Angelis, Maria
    [J]. TRENDS IN FOOD SCIENCE & TECHNOLOGY, 2018, 78 : 244 - 254
  • [57] A potential role for endogenous microflora in dormancy release, cytokinin metabolism and the response to fluridone in Lolium rigidum seeds
    Goggin, Danica E.
    Emery, R. J. Neil
    Kurepin, Leonid V.
    Powles, Stephen B.
    [J]. ANNALS OF BOTANY, 2015, 115 (02) : 293 - 301
  • [58] Pseudomonas fluorescens PTA-CT2 Triggers Local and Systemic Immune Response Against Botrytis cinerea in Grapevine
    Gruau, Charlotte
    Trotel-Aziz, Patricia
    Villaume, Sandra
    Rabenoelina, Fanja
    Clement, Christophe
    Baillieul, Fabienne
    Aziz, Aziz
    [J]. MOLECULAR PLANT-MICROBE INTERACTIONS, 2015, 28 (10) : 1117 - 1129
  • [59] Gu SH, 2020, NAT MICROBIOL, V5, P1002, DOI [10.1038/s41564-020-0719-8, 10.5061/dryad.p8cz8w9mb.]
  • [60] Beneficial soil bacterium Bacillus subtilis (GB03) augments salt tolerance of white clover
    Han, Qing-Qing
    Lu, Xin-Pei
    Bai, Jiang-Ping
    Qiao, Yan
    Pare, Paul W.
    Wang, Suo-Min
    Zhang, Jin-Lin
    Wu, Yong-Na
    Pang, Xiao-Pan
    Xu, Wen-Bo
    Wang, Zhi-Liang
    [J]. FRONTIERS IN PLANT SCIENCE, 2014, 5