On the importance of antiparallel C=O•••C-F interactions in N1-(3-hydroxypropy1)-5-fluorouracilate-Hg(II) complex: A combined X-ray and DFT study

被引:23
作者
Bauza, Antonio [1 ]
Terron, Angel [1 ]
Barcelo-Oliver, Miguel [1 ]
Garcia-Raso, Angel [1 ]
Frontera, Antonio [1 ]
机构
[1] Univ Illes Balears, Dept Quim, Ctra Valldemossa Km 7-5, E-07122 Palma De Mallorca, Spain
关键词
N-1-(3-hydroxypropy1)-5-fluorouracil; Hg(II); C=O center dot center dot center dot C-F interactions; Hg-hydroxyl bond; X-ray; DFT calculations; CRYSTAL-STRUCTURE; MOLECULAR-STRUCTURES; NUCLEOBASE COMPLEX; MERCURY BINDING; CRUCIAL ROLE; 5-FLUOROURACIL; URACIL; RECOGNITION; DERIVATIVES; POLYMERS;
D O I
10.1016/j.ica.2015.04.028
中图分类号
O61 [无机化学];
学科分类号
070301 ; 081704 ;
摘要
Herein we report the synthesis and X-ray characterization of a neutral mercury(II) complex of composition [Hg(L)(2)](n) (1), [L = N-1-(3-hydroxypropy1)-5-fluorouracilate]. The Hg(II) is bound to the N(3) atoms of both ligands in an essentially linear geometry. Mercury also interacts through short contacts with the 0(4) atoms of the uracil rings. The two bases are almost coplanar. Surprisingly, two hydroxyl groups from two different units are also weakly bound in apical positions. Single-crystal X-ray crystallography showed that the molecular complex aggregates into a coordination polymer. The packing assemblies observed in the solid state have been analysed and studied by means of theoretical DFT calculations. Unprecedented antiparallel C=O center dot center dot center dot C-F interactions are described since they have a strong influence in the crystal packing of the complex. We have also used the Cambridge Structural Database to examine the occurrence of C=O center dot center dot center dot C-F interaction in the solid state of X-ray structures. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:244 / 250
页数:7
相关论文
共 45 条
[1]   ELECTRONIC-STRUCTURE CALCULATIONS ON WORKSTATION COMPUTERS - THE PROGRAM SYSTEM TURBOMOLE [J].
AHLRICHS, R ;
BAR, M ;
HASER, M ;
HORN, H ;
KOLMEL, C .
CHEMICAL PHYSICS LETTERS, 1989, 162 (03) :165-169
[2]   STRUCTURAL AND THERMAL STUDIES OF A 5-FLUOROURACIL COMPLEX OF COPPER [J].
ALLAN, JR ;
MCCLOY, B .
THERMOCHIMICA ACTA, 1992, 208 :133-137
[3]  
Auffinger P, 2011, METAL IONS LIFE SCI, V9, P1, DOI 10.1039/978184973251200001
[4]  
Bader FW., 1994, Atoms in Molecules: A Quantum Theory
[5]   A QUANTUM-THEORY OF MOLECULAR-STRUCTURE AND ITS APPLICATIONS [J].
BADER, RFW .
CHEMICAL REVIEWS, 1991, 91 (05) :893-928
[6]   Experimental and theoretical study of N1-hexylcytosine and N1-hexylcytosinium nitrate: the crucial role of hydrophobic and anion-π interactions [J].
Barcelo-Oliver, Miquel ;
Bauza, Antonio ;
Baquero, Beatriz A. ;
Garcia-Raso, Angel ;
Terron, Angel ;
Molins, Elies ;
Frontera, Antonio .
TETRAHEDRON LETTERS, 2013, 54 (39) :5355-5360
[7]   Experimental and theoretical studies on the coordination chemistry of the N1-hexyl substituted pyrimidines (uracil, 5-fluorouracil and cytosine) [J].
Barcelo-Oliver, Miquel ;
Adriana Baquero, Beatriz ;
Bauza, Antonio ;
Garcia-Raso, Angel ;
Vich, Roberto ;
Mata, Ignasi ;
Molins, Elies ;
Terron, Angel ;
Frontera, Antonio .
DALTON TRANSACTIONS, 2013, 42 (21) :7631-7642
[8]   Experimental and theoretical study of thymine and cytosine derivatives: the crucial role of weak noncovalent interactions [J].
Barcelo-Oliver, Miquel ;
Baquero, Beatriz A. ;
Bauza, Antonio ;
Garcia-Raso, Angel ;
Terron, Angel ;
Mata, Ignasi ;
Molins, Elies ;
Frontera, Antonio .
CRYSTENGCOMM, 2012, 14 (18) :5777-5784
[9]   RNAs' uracil quartet model with a non-essential metal ion [J].
Barcelo-Oliver, Miquel ;
Estarellas, Carolina ;
Terron, Angel ;
Garcia-Raso, Angel ;
Frontera, Antonio .
CHEMICAL COMMUNICATIONS, 2011, 47 (16) :4646-4648
[10]   Experimental and theoretical study of uracil derivatives: the crucial role of weak fluorine-fluorine noncovalent interactions [J].
Barcelo-Oliver, Miquel ;
Estarellas, Carolina ;
Garcia-Raso, Angel ;
Terron, Angel ;
Frontera, Antonio ;
Quinonero, David ;
Mata, Ignasi ;
Molins, Elies ;
Deya, Pere M. .
CRYSTENGCOMM, 2010, 12 (11) :3758-3767