Evidence for Only Oxygenative Cleavage of Aldehydes to Alk(a/e)nes and Formate by Cyanobacterial Aldehyde Decarbonylases

被引:108
作者
Li, Ning [2 ]
Chang, Wei-chen [1 ]
Warui, Douglas M. [1 ]
Booker, Squire J. [1 ,2 ]
Krebs, Carsten [1 ,2 ]
Bollinger, J. Martin, Jr. [1 ,2 ]
机构
[1] Penn State Univ, Dept Chem, University Pk, PA 16802 USA
[2] Penn State Univ, Dept Biochem & Mol Biol, University Pk, PA 16802 USA
基金
美国国家科学基金会;
关键词
SPIN FE(IV) COMPLEX; ISOTOPE SHIFT; ACTIVATION; BIOFUELS; HYDROXYLATION; INTERMEDIATE; HALOGENASE; ALGAE; FUELS;
D O I
10.1021/bi300912n
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Cyanobacterial aldehyde decarbonylases (ADs) catalyze the conversion of C-n fatty aldehydes to formate (HCO2-) and the corresponding Cn-1 alk(a/e)nes. Previous studies of the Nostoc punctiforme (Np) AD produced in Escherichia coli (Ec) showed that this apparently hydrolytic reaction is actually a cryptically redox oxygenation process, in which one O-atom is incorporated from O-2 into formate and a protein-based reducing system (NADPH, ferredoxin, and ferredoxin reductase; N/F/FR) provides all four electrons needed for the complete reduction of O-2. Two subsequent publications by Marsh and co-workers [Das, et al. (2011) Angew. Chem. Int. Ed. 50, 7148-7152; Eser, et al. (2011) Biochemistry 50, 10743-10750] reported that their Ec-expressed Np and Prochlorococcus marinus (Pm) AD preparations transform aldehydes to the same products more rapidly by an O-2-independent, truly hydrolytic process, which they suggested proceeded by transient substrate reduction with obligatory participation by the reducing system (they used a chemical system, NADH and phenazine methosulfate; N/PMS). To resolve this discrepancy, we re-examined our preparations of both AD orthologues by a combination of (i) activity assays in the presence and absence of O-2 and (ii) O-18(2) and (H2O)-O-18 isotope-tracer experiments with direct mass-spectrometric detection of the HCO2- product. For multiple combinations of the AD orthologue (Np and Pm), reducing system (protein-based and chemical), and substrate (n-heptanal and n-octadecanal), our preparations strictly require O-2 for activity and do not support detectable hydrolytic formate production, despite having catalytic activities similar to or greater than those reported by Marsh and co-workers. Our results, especially of the O-18-tracer experiments, suggest that the activity observed by Marsh and co-workers could have arisen from contaminating O-2 in their assays. The definitive reaffirmation of the oxygenative nature of the reaction implies that the enzyme, initially designated as aldehyde decarbonylase when the Cl-derived coproduct was thought to be carbon monoxide rather than formate, should be redesignated as aldehyde-deformylating oxygenase (ADO).
引用
收藏
页码:7908 / 7916
页数:9
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