Genetic characterization of bank vole virus (BaVV), a new paramyxovirus isolated from kidneys of bank voles in Russia

被引：15

作者：

Alkhovsky, Sergey ^{[1
]}

Butenko, Alexander ^{[1
]}

Eremyan, Aykaz ^{[1
]}

Shchetinin, Alexey ^{[1
]}

机构：

[1] Minist Healthcare Russian Federat, DI Ivanovsky Inst Virol, NF Gamaleya Fed Res Ctr Epidemiol & Microbiol, 18 Gamaleya Str, Moscow 123098, Russia

来源：

ARCHIVES OF VIROLOGY | 2018年 / 163卷 / 03期

基金：

俄罗斯基础研究基金会;

关键词：

GENOME SEQUENCE;

D O I：

10.1007/s00705-017-3639-z

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

A genome of bank vole virus (BaVV), isolated from kidney tissues of bank voles (Myodes glareolus) in Russia in 1973, was sequenced. The genomic organization of BaVV (3'-N-P/V/C-M-F-G-L-5', 16,992 nt in length; GenBank accession number MF943130) is most similar to that of Mossman virus (MoV) and Nariva virus (NarPV), two ungrouped paramyxoviruses isolated from rodents in Australia and Trinidad, respectively. The proteins of BaVV have the highest level of sequence identity (ranging from 23-28% for G protein to 66-73% for M protein) to proteins of MoV and NarPV. The results of genetic and phylogenetic analysis suggest that BaVV represents a new species and, together with MoV and NarPV, belongs to a new, yet not established genus of the family Paramyxoviridae.

引用

页码：755 / 759

页数：5

共 11 条

[1] Taxonomy of the order Mononegavirales: update 2016 [J].

Afonso, Claudio L. ;

Amarasinghe, Gaya K. ;

Banyai, Krisztian ;

Bao, Yiming ;

Basler, Christopher F. ;

Bavari, Sina ;

Bejerman, Nicolas ;

Blasdell, Kim R. ;

Briand, Francois-Xavier ;

Briese, Thomas ;

Bukreyev, Alexander ;

Calisher, Charles H. ;

Chandran, Kartik ;

Cheng, Jiasen ;

Clawson, Anna N. ;

Collins, Peter L. ;

Dietzgen, Ralf G. ;

Dolnik, Olga ;

Domier, Leslie L. ;

Duerrwald, Ralf ;

Dye, John M. ;

Easton, Andrew J. ;

Ebihara, Hideki ;

Farkas, Szilvia L. ;

Freitas-Astua, Juliana ;

Formenty, Pierre ;

Fouchier, Ron A. M. ;

Fu, Yanping ;

Ghedin, Elodie ;

Goodin, Michael M. ;

Hewson, Roger ;

Horie, Masayuki ;

Hyndman, Timothy H. ;

Jiang, Daohong ;

Kitajima, Elliot W. ;

Kobinger, Gary P. ;

Kondo, Hideki ;

Kurath, Gael ;

Lamb, Robert A. ;

Lenardon, Sergio ;

Leroy, Eric M. ;

Li, Ci-Xiu ;

Lin, Xian-Dan ;

Liu, Lijiang ;

Longdon, Ben ;

Marton, Szilvia ;

Maisner, Andrea ;

Muhlberger, Elke ;

Netesov, Sergey V. ;

Nowotny, Norbert .

ARCHIVES OF VIROLOGY, 2016, 161 (08) :2351-2360

[2]

Butenko AM, 1975, ASPECTS MED VIROLOGY, P273

[3] Paramyxovirus mRNA editing, the 'rule of six' and error catastrophe: a hypothesis [J].

Kolakofsky, D ;

Roux, L ;

Garcin, D ;

Ruigrok, RWH .

JOURNAL OF GENERAL VIROLOGY, 2005, 86 :1869-1877

[4]

Lamb RA, 2007, FIELDS VIROLOGY, V1, P1449

[5] Complete genome sequence of Nariva virus, a rodent paramyxovirus [J].

Lambeth, L. S. ;

Yu, M. ;

Anderson, D. E. ;

Crameri, G. ;

Eaton, B. T. ;

Wang, L. -F. .

ARCHIVES OF VIROLOGY, 2009, 154 (02) :199-207

[6] Full-length genome sequence of Mossman virus, a novel paramyxovirus isolated from rodents in Australia [J].

Miller, PJ ;

Boyle, DB ;

Eaton, BT ;

Wang, LF .

VIROLOGY, 2003, 317 (02) :330-344

[7] SITE-DIRECTED MUTAGENESIS OF A CONSERVED HEXAPEPTIDE IN THE PARAMYXOVIRUS HEMAGGLUTININ-NEURAMINIDASE GLYCOPROTEIN - EFFECTS ON ANTIGENIC STRUCTURE AND FUNCTION [J].

MIRZA, AM ;

DENG, RT ;

IORIO, RM .

JOURNAL OF VIROLOGY, 1994, 68 (08) :5093-5099

[8]

Ronquist F, 2015, MRBAYES BAYESIAN INF

[9]

Stöver BC, 2010, BMC BIOINFORMATICS, V11, DOI 10.1186/1471-2105-11-7

[10]

Tamura K, 2013, MOL BIOL EVOL, V30, P2725, DOI [10.1093/molbev/mst197, 10.1093/molbev/msr121]

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