Chromatin Configuration Affects the Dynamics and Distribution of a Transiently Interacting Protein

被引：20

作者：

Amitai, Assaf ^{[1
,2
]}

机构：

[1] MIT, Dept Chem Engn, Inst Med Engn & Sci, Cambridge, MA 02139 USA

[2] Ragon Inst MGH MIT & Harvard, Cambridge, MA 02139 USA

来源：

BIOPHYSICAL JOURNAL | 2018年 / 114卷 / 04期

关键词：

DNA-BINDING PROTEINS; FACILITATED DIFFUSION; MAMMALIAN-CELLS; SINGLE-MOLECULE; GENE-REGULATION; LIVING CELLS; IN-VIVO; SEARCH; KINETICS; VISUALIZATION;

D O I：

10.1016/j.bpj.2017.12.037

中图分类号：

Q6 [生物物理学];

学科分类号：

071011 ;

摘要：

[No abstract available]

引用

页码：766 / 771

页数：6

共 41 条

[1] Polymer physics of nuclear organization and function [J].

Amitai, A. ;

Holcman, D. .

PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS, 2017, 678 :1-83

[2] Diffusing Polymers in Confined Microdomains and Estimation of Chromosomal Territory Sizes from Chromosome Capture Data [J].

Amitai, A. ;

Holcman, D. .

PHYSICAL REVIEW LETTERS, 2013, 110 (24)

[3] Visualization of Chromatin Decompaction and Break Site Extrusion as Predicted by Statistical Polymer Modeling of Single-Locus Trajectories [J].

Amitai, Assaf ;

Seeber, Andrew ;

Gasser, Susan M. ;

Holcman, David .

CELL REPORTS, 2017, 18 (05) :1200-1214

[4]

[Anonymous], 1981, A Second Course in Stochastic Processes

[5] Generalized Facilitated Diffusion Model for DNA-Binding Proteins with Search and Recognition States [J].

Bauer, Maximilian ;

Metzler, Ralf .

BIOPHYSICAL JOURNAL, 2012, 102 (10) :2321-2330

[6] Facilitated Diffusion of Proteins on Chromatin [J].

Benichou, O. ;

Chevalier, C. ;

Meyer, B. ;

Voituriez, R. .

PHYSICAL REVIEW LETTERS, 2011, 106 (03)

[7] Searching Fast for a Target on DNA without Falling to Traps [J].

Benichou, O. ;

Kafri, Y. ;

Sheinman, M. ;

Voituriez, R. .

PHYSICAL REVIEW LETTERS, 2009, 103 (13)

[8] DIFFUSION-DRIVEN MECHANISMS OF PROTEIN TRANSLOCATION ON NUCLEIC-ACIDS .1. MODELS AND THEORY [J].

BERG, OG ;

WINTER, RB ;

VONHIPPEL, PH .

BIOCHEMISTRY, 1981, 20 (24) :6929-6948

[9] Single molecule study of non-specific binding kinetics of Lacl in mammalian cells [J].

Caccianini, Laura ;

Normanno, Davide ;

Izeddin, Ignacio ;

Dahan, Maxime .

FARADAY DISCUSSIONS, 2015, 184 :393-400

[10] Facilitated diffusion framework for transcription factor search with conformational changes [J].

Cartailler, Jorome ;

Reingruber, Juergen .

PHYSICAL BIOLOGY, 2015, 12 (04)

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