Use of Crowd Innovation to Develop an Artificial Intelligence-Based Solution for Radiation Therapy Targeting

被引:47
作者
Mak, Raymond H. [1 ]
Endres, Michael G. [2 ,3 ]
Paik, Jin H. [2 ,4 ]
Sergeev, Rinat A. [2 ,4 ]
Aerts, Hugo [1 ,5 ]
Williams, Christopher L. [1 ]
Lakhani, Karim R. [2 ,4 ,6 ]
Guinan, Eva C. [1 ,2 ]
机构
[1] Harvard Med Sch, Brigham & Womens Hosp, Dana Farber Canc Inst, Dept Radiat Oncol, Boston, MA 02115 USA
[2] Harvard Univ, Lab Innovat Sci Harvard, Boston, MA 02115 USA
[3] Harvard Univ, Inst Quantitat Social Sci, Cambridge, MA 02138 USA
[4] Harvard Sch Business, Boston, MA USA
[5] Brigham & Womens Hosp, Dept Radiol, 75 Francis St, Boston, MA 02115 USA
[6] Natl Bur Econ Res, Cambridge, MA 02138 USA
关键词
CANCER;
D O I
10.1001/jamaoncol.2019.0159
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
IMPORTANCE Radiation therapy (RT) is a critical cancer treatment, but the existing radiation oncologist work force does not meet growing global demand. One key physician task in RT planning involves tumor segmentation for targeting, which requires substantial training and is subject to significant interobserver variation. OBJECTIVE To determine whether crowd innovation could be used to rapidly produce artificial intelligence (Al) solutions that replicate the accuracy of an expert radiation oncologist in segmenting lung tumors for RT targeting. DESIGN. SETTING. AND PARTICIPANTS We conducted a 10-week, prize-based, online, 3-phase challenge (prizes totaled $55 0 0 0). A well-curated data set, including computed tomographic (CT) scans and lung tumor segmentations generated by an expert for clinical care, was used for the contest (CT scans from 461 patients; median 157 images per scan; 77 942 images in total; 8144 images with tumor present). Contestants were provided a training set of 229 CT scans with accompanying expert contours to develop their algorithms and given feedback on their performance throughout the contest, including from the expert clinician. MAIN OUTCOMES AND MEASURES The Al algorithms generated by contestants were automatically scored on an independent data set that was withheld from contestants, and performance ranked using quantitative metrics that evaluated overlap of each algorithm's automated segmentations with the expert's segmentations. Performance was further benchmarked against human expert interobserver and intraobserver variation. RESULTS A total of 564 contestants from 62 countries registered for this challenge, and 34 (6%) submitted algorithms. The automated segmentations produced by the top 5 Al algorithms, when combined using an ensemble model, had an accuracy (Dice coefficient = 0.79) that was within the benchmark of mean interobserver variation measured between 6 human experts. For phase 1, the top 7 algorithms had average custom segmentation scores (5 scores) on the holdout data set ranging from 0.15 to 0.38, and suboptimal performance using relative measures of error. The average scores for phase 2 increased to 0.53 to 037, with a similar improvement in other performance metrics. In phase 3, performance of the top algorithm increased by an additional 9%. Combining the top 5 algorithms from phase 2 and phase 3 using an ensemble model, yielded an additional 9% to 12% improvement in performance with a final score reaching 0.68. CONCLUSIONS ANC RELEVANCE A combined crowd innovation and Al approach rapidly produced automated algorithms that replicated the skills of a highly trained physician for a critical task in radiation therapy. These Al algorithms could improve cancer care globally by transferring the skills of expert clinicians to under-resourced health care settings.
引用
收藏
页码:654 / 661
页数:8
相关论文
共 47 条
[1]   Reduced Lung-Cancer Mortality with Low-Dose Computed Tomographic Screening [J].
Aberle, Denise R. ;
Adams, Amanda M. ;
Berg, Christine D. ;
Black, William C. ;
Clapp, Jonathan D. ;
Fagerstrom, Richard M. ;
Gareen, Ilana F. ;
Gatsonis, Constantine ;
Marcus, Pamela M. ;
Sicks, JoRean D. .
NEW ENGLAND JOURNAL OF MEDICINE, 2011, 365 (05) :395-409
[2]   Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach [J].
Aerts, Hugo J. W. L. ;
Velazquez, Emmanuel Rios ;
Leijenaar, Ralph T. H. ;
Parmar, Chintan ;
Grossmann, Patrick ;
Cavalho, Sara ;
Bussink, Johan ;
Monshouwer, Rene ;
Haibe-Kains, Benjamin ;
Rietveld, Derek ;
Hoebers, Frank ;
Rietbergen, Michelle M. ;
Leemans, C. Rene ;
Dekker, Andre ;
Quackenbush, John ;
Gillies, Robert J. ;
Lambin, Philippe .
NATURE COMMUNICATIONS, 2014, 5
[3]  
[Anonymous], IEEE T PATTERN ANAL
[4]   The Lung Image Database Consortium, (LIDC) and Image Database Resource Initiative (IDRI): A Completed Reference Database of Lung Nodules on CT Scans [J].
Armato, Samuel G., III ;
McLennan, Geoffrey ;
Bidaut, Luc ;
McNitt-Gray, Michael F. ;
Meyer, Charles R. ;
Reeves, Anthony P. ;
Zhao, Binsheng ;
Aberle, Denise R. ;
Henschke, Claudia I. ;
Hoffman, Eric A. ;
Kazerooni, Ella A. ;
MacMahon, Heber ;
van Beek, Edwin J. R. ;
Yankelevitz, David ;
Biancardi, Alberto M. ;
Bland, Peyton H. ;
Brown, Matthew S. ;
Engelmann, Roger M. ;
Laderach, Gary E. ;
Max, Daniel ;
Pais, Richard C. ;
Qing, David P-Y ;
Roberts, Rachael Y. ;
Smith, Amanda R. ;
Starkey, Adam ;
Batra, Poonam ;
Caligiuri, Philip ;
Farooqi, Ali ;
Gladish, Gregory W. ;
Jude, C. Matilda ;
Munden, Reginald F. ;
Petkovska, Iva ;
Quint, Leslie E. ;
Schwartz, Lawrence H. ;
Sundaram, Baskaran ;
Dodd, Lori E. ;
Fenimore, Charles ;
Gur, David ;
Petrick, Nicholas ;
Freymann, John ;
Kirby, Justin ;
Hughes, Brian ;
Casteele, Alessi Vande ;
Gupte, Sangeeta ;
Sallam, Maha ;
Heath, Michael D. ;
Kuhn, Michael H. ;
Dharaiya, Ekta ;
Burns, Richard ;
Fryd, David S. .
MEDICAL PHYSICS, 2011, 38 (02) :915-931
[5]  
Badrinarayanan V., Segnet: A deep convolutional encoder-decoder architecture for image segmentation
[6]   Deep Learning Algorithm for Auto-Delineation of High-Risk Oropharyngeal Clinical Target Volumes With Built-In Dice Similarity Coefficient Parameter Optimization Function [J].
Cardenas, Carlos E. ;
McCarroll, Rachel E. ;
Court, Laurence E. ;
Elgohari, Baher A. ;
Elhalawani, Hesham ;
Fuller, Clifton D. ;
Kamal, Mona J. ;
Meheissen, Mohamed A. M. ;
Mohamed, Abdallah S. R. ;
Rao, Arvind ;
Williams, Bowman ;
Wong, Andrew ;
Yang, Jinzhong ;
Aristophanous, Michalis .
INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2018, 101 (02) :468-478
[7]   Accurate and reproducible invasive breast cancer detection in whole-slide images: A Deep Learning approach for quantifying tumor extent [J].
Cruz-Roa, Angel ;
Gilmore, Hannah ;
Basavanhally, Ajay ;
Feldman, Michael ;
Ganesan, Shridar ;
Shih, Natalie N. C. ;
Tomaszewski, John ;
Gonzalez, Fabio A. ;
Madabhushi, Anant .
SCIENTIFIC REPORTS, 2017, 7
[8]   Contouring variations and the role of atlas in non-small cell lung cancer radiation therapy: Analysis of a multi-institutional preclinical trial planning study [J].
Cui, Yunfeng ;
Chen, Wenzhou ;
Kong, Feng-Ming ;
Olsen, Lindsey A. ;
Beatty, Ronald E. ;
Maxim, Peter G. ;
Ritter, Timothy ;
Sohn, Jason W. ;
Higgins, Jane ;
Galvin, James M. ;
Xiao, Ying .
PRACTICAL RADIATION ONCOLOGY, 2015, 5 (02) :E67-E75
[9]   Radiation Therapy Infrastructure and Human Resources in Low- and Middle-Income Countries: Present Status and Projections for 2020 [J].
Datta, Niloy R. ;
Samiei, Massoud ;
Bodis, Stephan .
INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2014, 89 (03) :448-457
[10]   Comparison of Automated Atlas-Based Segmentation Software for Postoperative Prostate Cancer Radiotherapy [J].
Delpon, Gregory ;
Escande, Alexandre ;
Ruef, Timothee ;
Darreon, Julien ;
Fontaine, Jimmy ;
Noblet, Caroline ;
Supiot, Stephane ;
Lacornerie, Thomas ;
Pasquier, David .
FRONTIERS IN ONCOLOGY, 2016, 6