Transcriptional regulation at the yeast nuclear envelope

被引:15
|
作者
Steglich, Babett [1 ]
Sazer, Shelley [2 ,3 ]
Ekwall, Karl [1 ]
机构
[1] Karolinska Inst, Ctr Biosci, Dept Biosci & Nutr, Huddinge, Sweden
[2] Baylor Coll Med, Verna & Marrs McLean Dept Biochem & Mol Biol, Houston, TX 77030 USA
[3] Baylor Coll Med, Dept Mol & Cellular Biol, Houston, TX 77030 USA
基金
美国国家科学基金会; 瑞典研究理事会;
关键词
nuclear envelope; transcriptional regulation; telomeres; heterochromatin; nuclear pore complex; DOUBLE-STRAND BREAK; RNA-POLYMERASE-II; DNA ZIP CODE; GENE-EXPRESSION; CELL-CYCLE; SACCHAROMYCES-CEREVISIAE; GENOME ORGANIZATION; HUMAN-CHROMOSOMES; ANCHOR TELOMERES; SILENT CHROMATIN;
D O I
10.4161/nucl.26394
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The spatial organization of the genome inside the nucleus affects many nuclear processes, such as DNA replication, DNA repair and gene transcription. In metazoans, the nuclear periphery harbors mainly repressed genes that associate with the nuclear lamina. This review discusses how peripheral positioning is connected to transcriptional regulation in yeasts. Tethering of reporter genes to the nuclear envelope was found to result in transcriptional silencing. Similarly, repression of the silent mating type loci and subtelomeric genes is influenced by their position close to the nuclear envelope. In contrast, active genes are bound by nucleoporins and inducible genes associate with the nuclear pore complex upon activation. Taken together, these results portray the nuclear envelope as a platform for transcriptional regulation, both through activation at nuclear pores and silencing at the nuclear envelope.
引用
收藏
页码:379 / 389
页数:11
相关论文
共 50 条
  • [1] Seipin is involved in the regulation of phosphatidic acid metabolism at a subdomain of the nuclear envelope in yeast
    Wolinski, Heimo
    Hofbauer, Harald F.
    Hellauer, Klara
    Cristobal-Sarramian, Alvaro
    Kolb, Dagmar
    Radulovic, Maja
    Knittelfelder, Oskar L.
    Rechberger, Gerald N.
    Kohlwein, Sepp. D.
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS, 2015, 1851 (11): : 1450 - 1464
  • [2] Plant nuclear envelope as a hub connecting genome organization with regulation of gene expression
    Tang, Yu
    NUCLEUS, 2023, 14 (01)
  • [3] Nuclear Envelope Proteins Modulating the Heterochromatin Formation and Functions in Fission Yeast
    Hirano, Yasuhiro
    Asakawa, Haruhiko
    Sakuno, Takeshi
    Haraguchi, Tokuko
    Hiraoka, Yasushi
    CELLS, 2020, 9 (08) : 1 - 20
  • [4] Transcriptional Regulation in Yeast during Diauxic Shift and Stationary Phase
    Galdieri, Luciano
    Mehrotra, Swati
    Yu, Sean
    Vancura, Ales
    OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, 2010, 14 (06) : 629 - 638
  • [5] Yeast glucose pathways converge on the transcriptional regulation of trehalose biosynthesis
    Apweiler, Eva
    Sameith, Katrin
    Margaritis, Thanasis
    Brabers, Nathalie
    van de Pasch, Loes
    Bakker, Linda V.
    van Leenen, Dik
    Holstege, Frank C. P.
    Kemmeren, Patrick
    BMC GENOMICS, 2012, 13
  • [6] Yeast nucleoporins involved in passive nuclear envelope permeability
    Shulga, N
    Mosammaparast, N
    Wozniak, R
    Goldfarb, DS
    JOURNAL OF CELL BIOLOGY, 2000, 149 (05) : 1027 - 1038
  • [7] RegulatorDB: a resource for the analysis of yeast transcriptional regulation
    Choi, John A.
    Wyrick, John J.
    DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION, 2017,
  • [8] Post-transcriptional regulation shapes the transcriptome of quiescent budding yeast
    Greenlaw, Alison C.
    Alavattam, Kris G.
    Tsukiyama, Toshio
    NUCLEIC ACIDS RESEARCH, 2023, : 1043 - 1063
  • [9] ROBUSTNESS OF TRANSCRIPTIONAL REGULATION IN YEAST-LIKE MODEL BOOLEAN NETWORKS
    Tugrul, Murat
    Kabakcioglu, Alkan
    INTERNATIONAL JOURNAL OF BIFURCATION AND CHAOS, 2010, 20 (03): : 929 - 935
  • [10] Direct transcriptional regulation by nuclear microRNAs
    Salmanidis, Marika
    Pillman, Katherine
    Goodall, Gregory
    Bracken, Cameron
    INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY, 2014, 54 : 304 - 311