NMR chemical shift assignment of the C-terminal region of the Menangle virus phosphoprotein

被引:2
|
作者
Herr, N. [1 ]
Webby, M. N. [1 ]
Bulloch, E. M. M. [1 ]
Schmitz, M. [2 ]
Kingston, R. L. [1 ]
机构
[1] Univ Auckland, Sch Biol Sci, Auckland, New Zealand
[2] Univ Auckland, Sch Chem Sci, Auckland, New Zealand
关键词
Rubulavirus; Negative-sense single stranded RNA viruses; RNA-dependent RNA polymerase; Intrinsically disordered proteins; TRANSCRIPTION; SPECTROSCOPY; DOMAIN; LYSINE; SYSTEM;
D O I
10.1007/s12104-019-09876-z
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Menangle virus is a bat-borne paramyxovirus with zoonotic potential. The single-stranded RNA genome of the virus is encapsidated in a helical nucleocapsid which is the template for both transcription and genome replication. Each of these operations is performed by the viral RNA polymerase. The phosphoprotein is the non-catalytic subunit of the polymerase, and its C-terminal region enables the polymerase to engage with the nucleocapsid. Here, we report the H-1, N-15, and C-13 chemical shift assignments of the C-terminal region (amino acids 267-388) of the Menangle virus phosphoprotein. This region has a bipartite character, with a highly flexible and structurally disordered sequence preceding a structured nucleocapsid-binding domain. NMR chemical shift assignment will enable the detailed characterization of the dynamic behavior of the phosphoprotein, and its functional linkage with polymerase translocation.
引用
收藏
页码:195 / 199
页数:5
相关论文
共 50 条
  • [41] A C-terminal "Tail" Region in the Rous Sarcoma Virus Integrase Provides High Plasticity of Functional Integrase Oligomerization during Intasome Assembly
    Pandey, Krishan K.
    Bera, Sibes
    Shi, Ke
    Aihara, Hideki
    Grandgenett, Duane P.
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2017, 292 (12) : 5018 - 5030
  • [42] Chemical Biology Approaches Reveal Conserved Features of a C-Terminal Processing PDZ Protease
    Weski, Juliane
    Meltzer, Michael
    Spaan, Lina
    Moenig, Timon
    Oeljeklaus, Julian
    Hauske, Patrick
    Vouilleme, Lars
    Volkmer, Rudolf
    Boisguerin, Prisca
    Boyd, Dana
    Huber, Robert
    Kaiser, Markus
    Ehrmann, Michael
    CHEMBIOCHEM, 2012, 13 (03) : 402 - 408
  • [43] NMR proton chemical shift prediction of C.C mismatches in B-DNA
    Ng, Kui Sang
    Lam, Sik Lok
    JOURNAL OF MAGNETIC RESONANCE, 2015, 252 : 87 - 93
  • [44] Structure and oligomerization state of the C-terminal region of the Middle East respiratory syndrome coronavirus nucleoprotein
    Thi Hong Van Nguyen
    Lichiere, Julie
    Canard, Bruno
    Papageorgiou, Nicolas
    Attoumani, Sarah
    Ferron, Francois
    Coutard, Bruno
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2019, 75 : 8 - 15
  • [45] The C-terminal region of the plasmid partitioning protein TubY is a tetramer that can bind membranes and DNA
    Hayashi, Ikuko
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2020, 295 (51) : 17770 - 17780
  • [46] The structure of NLRP9 reveals a unique C-terminal region with putative regulatory function
    Kamitsukasa, Yukie
    Nakano, Kenji
    Murakami, Karin
    Hirata, Kunio
    Yamamoto, Masaki
    Shimizu, Toshiyuki
    Ohto, Umeharu
    FEBS LETTERS, 2022, 596 (07) : 876 - 885
  • [47] Crystal structure of the C-terminal region of human p97/DAP5
    Fan, Shilong
    Jia, Min-Ze
    Gong, Weimin
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2010, 78 (10) : 2385 - 2390
  • [48] Characterization of Vibrio cholerae Hfq Provides Novel Insights into the Role of the Hfq C-Terminal Region
    Vincent, Helen A.
    Henderson, Charlotte A.
    Ragan, Timothy J.
    Garza-Garcia, Acely
    Cary, Peter D.
    Gowers, Darren M.
    Malfois, Marc
    Driscoll, Paul C.
    Sobott, Frank
    Callaghan, Anastasia J.
    JOURNAL OF MOLECULAR BIOLOGY, 2012, 420 (1-2) : 56 - 69
  • [49] The host RNA polymerase II C-terminal domain is the anchor for replication of the influenza virus genome
    Krischuns, Tim
    Arragain, Benoit
    Isel, Catherine
    Paisant, Sylvain
    Budt, Matthias
    Wolff, Thorsten
    Cusack, Stephen
    Naffakh, Nadia
    NATURE COMMUNICATIONS, 2024, 15 (01)
  • [50] Development of a fast and accurate method of 13C NMR chemical shift prediction
    Blinov, Kirill A.
    Smurnyy, Yegor D.
    Churanova, Tatiana S.
    Elyashberg, Mikhail E.
    Williams, Antony J.
    CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2009, 97 (01) : 91 - 97