The origin and molecular epidemiology of HIV

被引:37
作者
Peeters, Martine [1 ]
Jung, Matthieu [1 ,2 ]
Ayouba, Ahidjo [1 ]
机构
[1] Univ Montpellier I, IRD, UMI 233, TransVIHMI, Montpellier, France
[2] Univ Montpellier 2, CNRS, UMR 5506, LIRMM,Inst Biol Computat, Montpellier, France
关键词
cross-species transmission; drug resistance; evolution; HIV-1; HIV-2; molecular epidemiology; recombinant; SIV; subtype; HUMAN-IMMUNODEFICIENCY-VIRUS; TRANSMITTED DRUG-RESISTANCE; ANTIRETROVIRAL TREATMENT; INCREASING PREVALENCE; GENETIC DIVERSITY; SUBTYPE C; VERTICAL TRANSMISSION; EASTERN CHIMPANZEES; RECOMBINANT FORM; INFECTION;
D O I
10.1586/14787210.2013.825443
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
HIV-1 in humans resulted from at least four cross-species transmissions of simian immunodeficiency viruses (SIVs) from chimpanzees and gorillas in West Central Africa, while HIV-2 viruses resulted from at least eight independent transmissions of SIVs infecting sooty mangabeys in West Africa only, where one of these transmissions (HIV-1 group M) is responsible for the global epidemic. HIV-1 M is subdivided into nine subtypes and a wide diversity of circulating recombinant forms (CRFs) and unique recombinant forms. The heterogenic HIV-1 M subtype/CRF distribution is the result of founder effects. The genetic diversity of HIV-1 continues to increase overtime due to demographic factors such as travel and migration and frequent co/superinfections. In addition, the expanded access to antiretrovirals leads to an increasing number of drug-resistant strains, especially in resource limited countries.
引用
收藏
页码:885 / 896
页数:12
相关论文
共 86 条
[1]   Recombination confounds the early evolutionary history of human immunodeficiency virus type 1: Subtype G is a circulating recombinant form [J].
Abecasis, Ana B. ;
Lemey, Philippe ;
Vidal, Nicole ;
de Oliveira, Tulio ;
Peeters, Martine ;
Camacho, Ricardo ;
Shapiro, Beth ;
Rambaut, Andrew ;
Vandamme, Anne-Mieke .
JOURNAL OF VIROLOGY, 2007, 81 (16) :8543-8551
[2]   HIV-1 subtype distribution and its demographic determinants in newly diagnosed patients in Europe suggest highly compartmentalized epidemics [J].
Abecasis, Ana B. ;
Wensing, Annemarie M. J. ;
Paraskevis, Dimitris ;
Vercauteren, Jurgen ;
Theys, Kristof ;
de Vijver, David A. M. C. Van ;
Albert, Jan ;
Asjo, Birgitta ;
Balotta, Claudia ;
Beshkov, Danail ;
Camacho, Ricardo J. ;
Clotet, Bonaventura ;
De Gascun, Cillian ;
Griskevicius, Algis ;
Grossman, Zehava ;
Hamouda, Osamah ;
Horban, Andrzej ;
Kolupajeva, Tatjana ;
Korn, Klaus ;
Kostrikis, Leon G. ;
Kuecherer, Claudia ;
Liitsola, Kirsi ;
Linka, Marek ;
Nielsen, Claus ;
Otelea, Dan ;
Paredes, Roger ;
Poljak, Mario ;
Puchhammer-Stoeckl, Elisabeth ;
Schmit, Jean-Claude ;
Sonnerborg, Anders ;
Stanekova, Danika ;
Stanojevic, Maja ;
Struck, Daniel ;
Boucher, Charles A. B. ;
Vandamme, Anne-Mieke .
RETROVIROLOGY, 2013, 10
[3]   Extensive survey on the prevalence and genetic diversity of SIVs in primate bushmeat provides insights into risks for potential new cross-species transmissions [J].
Aghokeng, Avelin F. ;
Ayouba, Ahidjo ;
Mpoudi-Ngole, Eitel ;
Loul, Severin ;
Liegeois, Florian ;
Delaporte, Eric ;
Peeters, Martine .
INFECTION GENETICS AND EVOLUTION, 2010, 10 (03) :386-396
[4]  
[Anonymous], 2011, ORIGINS AIDS
[5]   Prevalence of resistance to nevirapine in mothers and children after single-dose exposure to prevent vertical transmission of HIV-1:: a meta-analysis [J].
Arrive, Elise ;
Newell, Marie-Louise ;
Ekouevi, Didier K. ;
Chaix, Marie-Laure ;
Thiebaut, Rodolphe ;
Masquelier, Bernard ;
Leroy, Valeriane ;
Van de Perre, Philippe ;
Rouzioux, Christine ;
Dabis, Francois .
INTERNATIONAL JOURNAL OF EPIDEMIOLOGY, 2007, 36 (05) :1009-1021
[6]   HIV-1 group O infection in Cameroon, 1986-1998 [J].
Ayouba, A ;
Mauclère, P ;
Martin, PMV ;
Cunin, P ;
Mfoupouendoun, J ;
Njinku, B ;
Souquières, S ;
Simon, F .
EMERGING INFECTIOUS DISEASES, 2001, 7 (03) :466-467
[7]  
Ayouba A, 2012, 19 C RETR OPP INF SE
[8]  
BARIN F, 1985, LANCET, V2, P1387
[9]   Phylogeographic Analysis of HIV-1 Subtype C Dissemination in Southern Brazil [J].
Bello, Gonzalo ;
Zanotto, Paolo M. de A. ;
Iamarino, Atila ;
Graef, Tiago ;
Pinto, Aguinaldo R. ;
Couto-Fernandez, Jose C. ;
Morgado, Mariza G. .
PLOS ONE, 2012, 7 (04)
[10]   CAUSES OF HIV DIVERSITY [J].
BONHOEFFER, S ;
HOLMES, EC ;
NOWAK, MA .
NATURE, 1995, 376 (6536) :125-125