Dynamics extracted from fixed cells reveal feedback linking cell growth to cell cycle

被引:160
作者
Kafri, Ran [1 ]
Levy, Jason [2 ]
Ginzberg, Miriam B. [1 ]
Oh, Seungeun [1 ]
Lahav, Galit [1 ]
Kirschner, Marc W. [1 ]
机构
[1] Harvard Univ, Sch Med, Dept Syst Biol, Boston, MA 02115 USA
[2] Univ Ottawa, Dept Math & Stat, Ottawa, ON K1N 6N5, Canada
关键词
MASS;
D O I
10.1038/nature11897
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Biologists have long been concerned about what constrains variation in cell size, but progress in this field has been slow and stymied by experimental limitations'. Here we describe a new method, ergodic rate analysis (ERA), that uses single-cell measurements of fixed steady-state populations to accurately infer the rates of molecular events, including rates of cell growth. ERA exploits the fact that the number of cells in a particular state is related to the average transit time through that state(2). With this method, it is possible to calculate full time trajectories of any feature that can be labelled in fixed cells, for example levels of phosphoproteins or total cellular mass. Using ERA we find evidence for a size-discriminatory process at the G1/S transition that acts to decrease cell-to-cell size variation.
引用
收藏
页码:480 / 483
页数:4
相关论文
共 11 条
  • [1] Deen WM, 2012, ANAL TRANSPORT PHENO, V2nd
  • [2] CELL-SHAPE REGULATION AND CELL-CYCLE IN EMBRYONIC LENS CELLS
    HENDRIX, RW
    ZWAAN, J
    [J]. NATURE, 1974, 247 (5437) : 145 - 147
  • [3] Dynamic Epitope Expression from Static Cytometry Data: Principles and Reproducibility
    Jacobberger, James W.
    Avva, Jayant
    Sreenath, Sree N.
    Weis, Michael C.
    Stefan, Tammy
    [J]. PLOS ONE, 2012, 7 (02):
  • [4] A QUANTITATIVE CYTOCHEMICAL INVESTIGATION OF RELATIONSHIP BETWEEN CELL MASS AND INITIATION OF DNA SYNTHESIS IN MOUSE FIBROBLASTS IN VITRO
    KILLANDER, D
    ZETTERBERG, A
    [J]. EXPERIMENTAL CELL RESEARCH, 1965, 40 (01) : 12 - +
  • [5] Optical measurement of cycle-dependent cell growth
    Mir, Mustafa
    Wang, Zhuo
    Shen, Zhen
    Bednarz, Michael
    Bashir, Rashid
    Golding, Ido
    Prasanth, Supriya G.
    Popescu, Gabriel
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (32) : 13124 - 13129
  • [6] MITCHISON J.M., 1971, BIOL CELL CYCLE, P128
  • [7] Growth during the cell cycle
    Mitchison, JM
    [J]. INTERNATIONAL REVIEW OF CYTOLOGY - A SURVEY OF CELL BIOLOGY, VOL 226, 2003, 226 : 165 - 258
  • [8] Optical imaging of cell mass and growth dynamics
    Popescu, Gabriel
    Park, YoungKeun
    Lue, Niyom
    Best-Popescu, Catherine
    Deflores, Lauren
    Dasari, Ramachandra R.
    Feld, Michael S.
    Badizadegan, Kamran
    [J]. AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY, 2008, 295 (02): : C538 - C544
  • [9] Visualizing spatiotemporal dynamics of multicellular cell-cycle progression
    Sakaue-Sawano, Asako
    Kurokawa, Hiroshi
    Morimura, Toshifumi
    Hanyu, Aki
    Hama, Hiroshi
    Osawa, Hatsuki
    Kashiwagi, Saori
    Fukami, Kiyoko
    Miyata, Takaki
    Miyoshi, Hiroyuki
    Imamura, Takeshi
    Ogawa, Masaharu
    Masai, Hisao
    Miyawaki, Atsushi
    [J]. CELL, 2008, 132 (03) : 487 - 498
  • [10] Direct observation of mammalian cell growth and size regulation
    Son, Sungmin
    Tzur, Amit
    Weng, Yaochung
    Jorgensen, Paul
    Kim, Jisoo
    Kirschner, Marc W.
    Manalis, Scott R.
    [J]. NATURE METHODS, 2012, 9 (09) : 910 - +