Regulated Expression of PTPRJ/CD148 and an Antisense Long Noncoding RNA in Macrophages by Proinflammatory Stimuli

被引:37
作者
Dave, Richa K. [1 ,2 ,3 ]
Dinger, Marcel E. [4 ,5 ]
Andrew, Megan [3 ]
Askarian-Amiri, Marjan [1 ]
Hume, David A. [1 ,2 ,6 ]
Kellie, Stuart [1 ,2 ,3 ]
机构
[1] Univ Queensland, Inst Mol Biosci, Brisbane, Qld, Australia
[2] Univ Queensland, CRC CID, Brisbane, Qld, Australia
[3] Univ Queensland, Australian Infect Dis Res Ctr, Sch Chem & Mol Biosci, Brisbane, Qld, Australia
[4] Univ Queensland, Diamantina Inst, Brisbane, Qld, Australia
[5] St Vincents Hosp, Garvan Inst Med Res, Darlinghurst, NSW 2010, Australia
[6] Univ Edinburgh, Roslin Inst, Roslin, Midlothian, Scotland
基金
澳大利亚国家健康与医学研究理事会;
关键词
PROTEIN-TYROSINE-PHOSPHATASE; PLASMINOGEN-ACTIVATOR GENE; TRANSCRIPTION FACTORS; INTERFERON-GAMMA; CELL; RECEPTOR; CD148; CSF-1; CANCER; GROWTH;
D O I
10.1371/journal.pone.0068306
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
PTPRJ/CD148 is a tyrosine phosphatase that has tumour suppressor-like activity. Quantitative PCR of various cells and tissues revealed that it is preferentially expressed in macrophage-enriched tissues. Within lymphoid tissues immunohistochemistry revealed that PTPRJ/CD148 co-localised with F4/80, indicating that macrophages most strongly express the protein. Macrophages express the highest basal level of ptprj, and this is elevated further by treatment with LPS and other Toll-like receptor ligands. In contrast, CSF-1 treatment reduced basal and stimulated Ptprj expression in human and mouse cells, and interferon also repressed Ptprj expression. We identified a 1006 nucleotide long noncoding RNA species, Ptprj-as1 that is transcribed antisense to Ptprj. Ptprj-as1 was highly expressed in macrophage-enriched tissue and was transiently induced by Toll-like receptor ligands with a similar time course to Ptprj. Finally, putative transcription factor binding sites in the promoter region of Ptprj were identified.
引用
收藏
页数:13
相关论文
共 84 条
[41]   Long non-coding RNAs: insights into functions [J].
Mercer, Tim R. ;
Dinger, Marcel E. ;
Mattick, John S. .
NATURE REVIEWS GENETICS, 2009, 10 (03) :155-159
[42]   Protein tyrosine phosphatases and the immune response [J].
Mustelin, T ;
Vang, T ;
Bottini, N .
NATURE REVIEWS IMMUNOLOGY, 2005, 5 (01) :43-57
[43]  
Nagamura-Inoue T, 2001, Int Rev Immunol, V20, P83, DOI 10.3109/08830180109056724
[44]   Murine DEP-1, a receptor protein tyrosine phosphatase, is expressed in macrophages and is regulated by CSF-1 and LPS [J].
Osborne, JM ;
den Elzen, N ;
Lichanska, AM ;
Costelloe, EO ;
Yamada, T ;
Cassady, AI ;
Hume, DA .
JOURNAL OF LEUKOCYTE BIOLOGY, 1998, 64 (05) :692-701
[45]   EXPRESSION OF DEP-1, A RECEPTOR-LIKE PROTEIN-TYROSINE-PHOSPHATASE, IS ENHANCED WITH INCREASING CELL-DENSITY [J].
OSTMAN, A ;
YANG, Q ;
TONKS, NK .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1994, 91 (21) :9680-9684
[46]   Hepatocyte growth factor receptor tyrosine kinase met is a substrate of the receptor protein-tyrosine phosphatase DEP-1 [J].
Palka, HL ;
Park, M ;
Tonks, NK .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (08) :5728-5735
[47]   Genome-Wide Identification of Long Noncoding RNAs in CD8+ T Cells [J].
Pang, Ken C. ;
Dinger, Marcel E. ;
Mercer, Tim R. ;
Malquori, Lorenzo ;
Grimmond, Sean M. ;
Chen, Weisan ;
Mattick, John S. .
JOURNAL OF IMMUNOLOGY, 2009, 182 (12) :7738-7748
[48]   RANKL protein is expressed at the pannus-bone interface at sites of articular bone erosion in rheumatoid arthritis [J].
Pettit, A. R. ;
Walsh, N. C. ;
Manning, C. ;
Goldring, S. R. ;
Gravallese, E. M. .
RHEUMATOLOGY, 2006, 45 (09) :1068-1076
[49]   Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs [J].
Ponjavic, Jasmina ;
Ponting, Chris P. ;
Lunter, Gerton .
GENOME RESEARCH, 2007, 17 (05) :556-565
[50]  
PRODUCTION F, FASEB J, P20