Isolation and molecular characterization of infectious bronchitis virus from recent outbreaks in broiler flocks reveals emergence of novel strain in India

被引:22
作者
Sumi, Vikshe [1 ]
Singh, Shambhu Dayal [1 ]
Dhama, Kuldeep [1 ]
Gowthaman, Vasudevan [1 ]
Barathidasan, Rajamani [1 ]
Sukumar, Kuppannan [2 ]
机构
[1] Indian Vet Res Inst, Div Pathol, Avian Dis Sect, Bareilly 243122, Uttar Pradesh, India
[2] Vet Coll & Res Inst, Dept Vet Microbiol, Namakkal 637003, Tamil Nadu, India
关键词
Infectious bronchitis; 4/91; strain; Molecular characterization; S1; gene; India; POLYMERASE CHAIN-REACTION; EPIDEMIOLOGY; EVOLUTION; GENE; S1;
D O I
10.1007/s11250-012-0140-2
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
In this study, two isolates of infectious bronchitis virus (IBV) from field outbreaks in 2008 (India/LKW/56/IVRI/08) and 2010 (India/NMK/72/IVRI/10) from broiler chickens in India were isolated and characterized. Reverse transcription polymerase chain reaction-restriction fragment length polymorphism of the entire S1 gene revealed that these isolates belong to two different genotypes, India/LKW/56/IVRI/08 as Mass strain whereas India/NMK/72/IVRI/10 as of different genotype. Nucleotide sequencing analysis showed that India/LKW/56/IVRI/08 shared 99 % homology with THA280252 (Thailand) and India/NMK/72/IVRI/10 shared greater than 99 % homology with 4/91 pathogenic strain (UK), JP/Wakayama/2/2004 (Japan) and TA03 (China), while the two Indian IBV isolates shared 73 % identity between them. Phylogenetic data allowed classification of two Indian isolates, India/LKW/56/IVRI/08 as having unique lineage within Mass genotype and India/NMK/72/IVRI/10 as of 4/91 genotype. Our study confirmed the presence of 4/91 (793/B) IBV nephropathogenic strain for the first time in India by virus isolation and sequencing.
引用
收藏
页码:1791 / 1795
页数:5
相关论文
共 16 条
  • [1] Universal oligonucleotides for the detection of infectious bronchitis virus by the polymerase chain reaction
    Adzhar, A
    Shaw, K
    Britton, P
    Cavanagh, D
    [J]. AVIAN PATHOLOGY, 1996, 25 (04) : 817 - 836
  • [2] Detection of Massachusetts and Arkansas serotypes of infectious bronchitis virus in broilers
    Alvarado, IR
    Villegas, P
    El-Attrache, J
    Jackwood, MW
    [J]. AVIAN DISEASES, 2006, 50 (02) : 292 - 297
  • [3] [Anonymous], 2008, AV INF BRONCH, P443
  • [4] Phylogenetic analysis of partial S1 and N gene sequences of infectious bronchitis virus isolates from Italy revealed genetic diversity and recombination
    Bochkov, Yury A.
    Tosi, Giovanni
    Massi, Paola
    Drygin, Vladimir V.
    [J]. VIRUS GENES, 2007, 35 (01) : 65 - 71
  • [5] Cavanagh D., 2008, Diseases of Poultry, V12th, P117
  • [6] Molecular epidemiology and evolution of avian infectious bronchitis virus in Spain over a fourteen-year period
    Dolz, Roser
    Pujols, Joan
    Ordonez, German
    Porta, Ramon
    Majo, Natalia
    [J]. VIROLOGY, 2008, 374 (01) : 50 - 59
  • [7] Molecular epizootiology of infectious bronchitis virus in Sweden indicating the involvement of a vaccine strain
    Farsang, A
    Ros, C
    Renström, LHM
    Baule, C
    Soós, T
    Belák, S
    [J]. AVIAN PATHOLOGY, 2002, 31 (03) : 229 - 236
  • [8] Viral respiratory diseases (ILT, aMPV infections, IB): are they ever under control?
    Jones, Richard C.
    [J]. BRITISH POULTRY SCIENCE, 2010, 51 (01) : 1 - 11
  • [9] DIFFERENTIATION OF INFECTIOUS-BRONCHITIS VIRUS SEROTYPES USING POLYMERASE CHAIN-REACTION AND RESTRICTION-FRAGMENT-LENGTH-POLYMORPHISM ANALYSIS
    KWON, HM
    JACKWOOD, MW
    GELB, J
    [J]. AVIAN DISEASES, 1993, 37 (01) : 194 - 202
  • [10] Molecular Characterization and Pathogenicity of Infectious Bronchitis Coronaviruses: Complicated Evolution and Epidemiology in China Caused by Cocirculation of Multiple Types of Infectious Bronchitis Coronaviruses
    Liu, Shengwang
    Zhang, Xiaonan
    Wang, Yu
    Li, Chengren
    Han, Zongxi
    Shao, Yuhao
    Li, Huixin
    Kong, Xiangang
    [J]. INTERVIROLOGY, 2009, 52 (04) : 223 - 234