Metabolic engineering of Escherichia coli W3110 strain by incorporating genome-level modifications and synthetic plasmid modules to enhance L-Dopa production from glycerol

被引:26
作者
Das, Arunangshu [1 ]
Tyagi, Neetu [1 ]
Verma, Anita [1 ]
Akhtar, Sarfaraz [1 ]
Mukherjee, Krishna J. [2 ]
机构
[1] Jawaharlal Nehru Univ, Sch Biotechnol, New Delhi 110067, India
[2] Nagarjuna Fertilizers & Chem Ltd, Kakinada, Andhra Pradesh, India
关键词
Genome; L-Dopa; metabolic engineering; pathway; plasmid modules; RELATIVE GENE-EXPRESSION; L-TYROSINE PRODUCTION; L-3,4-DIHYDROXYPHENYLALANINE; STRATEGIES; GLUCOSE;
D O I
10.1080/10826068.2018.1487851
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
L-Tyrosine which is one of the terminal metabolites of highly regulated aromatic amino-acid biosynthesis pathway in Escherichia coli is a precursor for synthesis of L-Dopa. In this study, we report over production of L-Dopa by enhancing expression of rate limiting isoenzyme of shikimate kinase (aroL), chorismate synthase (aroC), aromatic-amino-acid aminotransferase (tyrB) and 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) form a plasmid module harboring five enzymes under two inducible promoters converting shikimate to tyrosine. 4-hydroxyphenylacetate-3-hydrolase (hpaBC) which converts L-Tyrosine to L-Dopa was expressed constitutively from a separate plasmid module. Feedback deregulated expression of 3-Deoxy-D-arabinoheptulosonate-7-phosphate (DAHP) synthase (aroG*) replacing wild type aroG under its natural promoter led to enhancement of L-Dopa production. Deletion of transcriptional repressor tyrR and links to other competing pathways improved titers of L-Dopa. We focused on having a balanced flux by constitutive expression of pathway enzymes from plasmid constructs rather than achieving higher amounts of catalytic protein by induction. We observed glycerol when used as a carbon source for the final strain led to low acid production. The best performing strain led to decoupling of acid production and product formation in bioreactor. Fed batch analysis of the final strain led to 12.5g/L of L-Dopa produced in bioreactor.
引用
收藏
页码:671 / 682
页数:12
相关论文
共 38 条
[1]   Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis [J].
Akashi, H ;
Gojobori, T .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (06) :3695-3700
[2]  
Alon Uri, 2006, An Introduction to Systems Biology: Design Principles of Biological Circuits
[3]  
[Anonymous], LIST RES REP US 1
[4]  
[Anonymous], LIST IMP DAT BAS US
[5]   Separation and quantitation of water soluble cellular metabolites by hydrophilic interaction chromatography-tandem mass spectrometry [J].
Bajad, Sunil U. ;
Lu, Wenyun ;
Kimball, Elizabeth H. ;
Yuan, Jie ;
Peterson, Celeste ;
Rabinowitz, Joshua D. .
JOURNAL OF CHROMATOGRAPHY A, 2006, 1125 (01) :76-88
[6]   Dynamics involved in catalysis by single-component and two-component flavin-dependent aromatic hydroxylases [J].
Ballou, DP ;
Entsch, B ;
Cole, LJ .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2005, 338 (01) :590-598
[7]   Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli [J].
Bennett, Bryson D. ;
Kimball, Elizabeth H. ;
Gao, Melissa ;
Osterhout, Robin ;
Van Dien, Stephen J. ;
Rabinowitz, Joshua D. .
NATURE CHEMICAL BIOLOGY, 2009, 5 (08) :593-599
[8]   Metabolic engineering for microbial production of aromatic amino acids and derived compounds [J].
Bongaerts, J ;
Krämer, M ;
Müller, U ;
Raeven, L ;
Wubbolts, M .
METABOLIC ENGINEERING, 2001, 3 (04) :289-300
[9]   Glucose becomes one of the worst carbon sources for E-coli on poor nitrogen sources due to suboptimal levels of cAMP [J].
Bren, Anat ;
Park, Junyoung O. ;
Towbin, Benjamin D. ;
Dekel, Erez ;
Rabinowitz, Joshua D. ;
Alon, Uri .
SCIENTIFIC REPORTS, 2016, 6
[10]  
Cabiscol Elisa, 2000, International Microbiology, V3, P3