On the Density Dependence of the Integral Equation Coarse-Graining Effective Potential

被引:24
|
作者
Dinpajooh, Mohammadhasan
Guenza, Marina G. [1 ]
机构
[1] Univ Oregon, Dept Chem & Biochem, Eugene, OR 97403 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2018年 / 122卷 / 13期
基金
美国国家科学基金会;
关键词
THERMODYNAMIC CONSISTENCY; STATISTICAL-MECHANICS; POLYMER-CHAINS; LIQUID-STATE; MODELS; SIMULATIONS; FLUIDS; MELTS; CONFORMATION; METALS;
D O I
10.1021/acs.jpcb.7b10494
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Coarse-graining (CG) procedures provide computationally efficient methods for investigating the corresponding long time- and length-scale processes. In the bottom-up approaches, the effective interactions between the CG sites are obtained using the information from the atomistic simulations, but reliable CG procedures are required to preserve the structure and thermodynamics. In this regard, the integral equation coarse-graining (IECG) method is a promising approach that uses the first-principles Ornstein-Zernike equation in liquid state theory to determine the effective potential between CG sites. In this work, we present the details of the IECG method while treating the density as an intrinsic property and active variable of the CG system. Performing extensive simulations of polymer melts, we show that the IECG theory/simulation and atomistic simulation results are consistent in structural properties such as the pair-correlation functions and form factors, and also thermodynamic properties such as pressure. The atomistic simulations of the liquids show that the structure is largely sensitive to the repulsive part of the potential. Similarly, the IECG simulations of polymeric liquids show that the structure can be determined by the relatively short-range CG repulsive interactions, but the pressure is only accurately determined once the long-range, weak CG attractive interactions are included. This is in agreement with the seminal work by Widom on the influence of the potential on the phase diagram of the liquid [Widom, B. Science 1967, 157, 375-382]. Other aspects of the IECG theory/simulations are also discussed.
引用
收藏
页码:3426 / 3440
页数:15
相关论文
共 50 条
  • [21] Coarse-graining in polymer simulations
    Girard, S
    Müller-Plathe, F
    NOVEL METHODS IN SOFT MATTER SIMULATIONS, 2004, 640 : 327 - 356
  • [22] THE MULTISCALE COARSE-GRAINING METHOD
    Lu, Lanyuan
    Voth, Gregory A.
    ADVANCES IN CHEMICAL PHYSICS, VOL 149, 2012, 149 : 47 - 81
  • [23] Rigorous Progress in Coarse-Graining
    Noid, W. G.
    Szukalo, Ryan J.
    Kidder, Katherine M.
    Lesniewski, Maria C.
    ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 2024, 75 : 21 - 45
  • [24] On Mobius Duality and Coarse-Graining
    Huillet, Thierry
    Martinez, Servet
    JOURNAL OF THEORETICAL PROBABILITY, 2016, 29 (01) : 143 - 179
  • [25] Coarse-graining in quantum mechanics
    Voth, Gregory A.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2013, 245
  • [26] Coarse-Graining and the Blackwell Order
    Rauh, Johannes
    Banerjee, Pradeep Kr.
    Olbrich, Eckehard
    Jost, Juergen
    Bertschinger, Nils
    Wolpert, David
    ENTROPY, 2017, 19 (10):
  • [27] Coarse-graining and multiscale modeling
    Guenza, Marina
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2013, 246
  • [28] Coarse-graining of multiprotein assemblies
    Saunders, Marissa G.
    Voth, Gregory A.
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2012, 22 (02) : 144 - 150
  • [29] Coarse-graining in quantum mechanics
    Voth, Gregory A.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2012, 243
  • [30] Recent advances in coarse-graining
    Voth, Gregory
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2019, 258