Tapping into the genome: the role of CSF ctDNA liquid biopsy in glioma

被引:11
作者
Friedman, Joshua S. [1 ]
Hertz, Charli Ann J. [2 ]
Karajannis, Matthias A. [3 ]
Miller, Alexandra M. [1 ,3 ]
机构
[1] Mem Sloan Kettering Canc Ctr, Dept Neurol, New York, NY 10065 USA
[2] Mem Sloan Kettering Canc Ctr, Oncol & Pathogenesis Program, New York, NY 10065 USA
[3] Mem Sloan Kettering Canc Ctr, Dept Pediat, New York, NY 10065 USA
关键词
circulating tumor DNA (ctDNA); cerebrospinal fluid (CSF); glioma; liquid biopsy; primary brain tumors; CELL-FREE DNA; CENTRAL-NERVOUS-SYSTEM; CIRCULATING TUMOR DNA; CEREBROSPINAL-FLUID; DIGITAL PCR; MUTATIONS; DIAGNOSIS; CANCER; BRAIN; PSEUDOPROGRESSION;
D O I
10.1093/noajnl/vdac034
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Liquid biopsy has emerged as a novel noninvasive tool in cancer diagnostics. While significant strides have been made in other malignancies using liquid biopsy for diagnosis, disease monitoring, and treatment selection, development of these assays has been more challenging for brain tumors. Recently, research in primary and metastatic brain tumors has begun to harness the potential utility of liquid biopsy-particularly using circulating tumor DNA (ctDNA). Initial studies to identify ctDNA in plasma of brain tumor patients have shown feasibility, but the yield of ctDNA is far below that for other malignancies. Attention has therefore turned to the cerebrospinal fluid (CSF) as a more robust source of ctDNA. This review discusses the unique considerations in liquid biopsy for glioma and places them in the context of the work to date. We address the utility of CSF liquid biopsy for diagnosis, longitudinal monitoring, tracking tumor evolution, clinical trial eligibility, and prognostication. We discuss the differences in assay requirements for each clinical application to best optimize factors such as efficacy, cost, and speed. Ultimately, CSF liquid biopsy has the potential to transform how we manage primary brain tumor patients.
引用
收藏
页码:33 / 40
页数:8
相关论文
共 50 条
[31]   Detection of Glioma-Related Hotspot Mutations Through Sequencing of Cerebrospinal Fluid (CSF)-Derived Circulating Tumor DNA: A Pilot Study on CSF-Based Liquid Biopsy for Primary Spinal Cord Astrocytoma [J].
Cheng, Lei ;
Duan, Wanru ;
Guan, Jian ;
Wang, Kai ;
Liu, Zhenlei ;
Wang, Xingwen ;
Wang, Zuowei ;
Wu, Hao ;
Chen, Zan ;
Jian, Fengzeng .
NEUROSPINE, 2023, 20 (02) :701-708
[32]   Current Role and Future Potential of CSF ctDNA for the Diagnosis and Clinical Management of Pediatric Central Nervous System Tumors [J].
Miller, Alexandra M. ;
Karajannis, Matthias A. .
JOURNAL OF THE NATIONAL COMPREHENSIVE CANCER NETWORK, 2022, 20 (12) :1363-1369
[33]   CSF-based liquid biopsy pointing to a diagnosis of diffuse glioma in a patient with supposed neurodegenerative disorder [J].
Pieri, Valentina ;
Curti, Davide Gusmeo ;
Paterra, Rosina ;
Azzimonti, Matteo ;
Sferruzza, Giacomo ;
Berzero, Giulia ;
Cardamone, Rosalinda ;
Anzalone, Nicoletta ;
Agosta, Federica ;
Caso, Francesca ;
Magnani, Giuseppe ;
Finocchiaro, Gaetano ;
Filippi, Massimo .
NEUROLOGICAL SCIENCES, 2023, 44 (09) :3271-3277
[34]   CSF-based liquid biopsy pointing to a diagnosis of diffuse glioma in a patient with supposed neurodegenerative disorder [J].
Valentina Pieri ;
Davide Gusmeo Curti ;
Rosina Paterra ;
Matteo Azzimonti ;
Giacomo Sferruzza ;
Giulia Berzero ;
Rosalinda Cardamone ;
Nicoletta Anzalone ;
Federica Agosta ;
Francesca Caso ;
Giuseppe Magnani ;
Gaetano Finocchiaro ;
Massimo Filippi .
Neurological Sciences, 2023, 44 :3271-3277
[35]   Prediction of plasma ctDNA fraction and prognostic implications of liquid biopsy in advanced prostate cancer [J].
Fonseca, Nicolette M. ;
Maurice-Dror, Corinne ;
Herberts, Cameron ;
Tu, Wilson ;
Fan, William ;
Murtha, Andrew J. ;
Kollmannsberger, Catarina ;
Kwan, Edmond M. ;
Parekh, Karan ;
Schonlau, Elena ;
Bernales, Cecily Q. ;
Donnellan, Grainne ;
Ng, Sarah W. S. ;
Sumiyoshi, Takayuki ;
Vergidis, Joanna ;
Noonan, Krista ;
Finch, Daygen L. ;
Zulfiqar, Muhammad ;
Miller, Stacy ;
Parimi, Sunil ;
Lavoie, Jean-Michel ;
Hardy, Edward ;
Soleimani, Maryam ;
Nappi, Lucia ;
Eigl, Bernhard J. ;
Kollmannsberger, Christian ;
Taavitsainen, Sinja ;
Nykter, Matti ;
Tolmeijer, Sofie H. ;
Boerrigter, Emmy ;
Mehra, Niven ;
van Erp, Nielka P. ;
De Laere, Bram ;
Lindberg, Johan ;
Gronberg, Henrik ;
Khalaf, Daniel J. ;
Annala, Matti ;
Chi, Kim N. ;
Wyatt, Alexander W. .
NATURE COMMUNICATIONS, 2024, 15 (01)
[36]   The road-map for establishment of a prognostic molecular marker panel in glioma using liquid biopsy: current status and future directions [J].
Shrivastava, Richa ;
Gandhi, Puneet ;
Gothalwal, Ragini .
CLINICAL & TRANSLATIONAL ONCOLOGY, 2022, 24 (09) :1702-1714
[37]   The role of ctDNA from liquid biopsy in predicting survival outcomes in HPV-negative head and neck cancer: A meta-analysis [J].
Kaorey, Nivedita ;
Dickinson, Kyle ;
Agnihotram, Venkata Ramana ;
Zeitouni, Anthony ;
Sadeghi, Nader ;
V. Burnier, Julia .
ORAL ONCOLOGY, 2025, 161
[38]   Liquid biopsy detection of genomic alterations in pediatric brain tumors from cell-free DNA in peripheral blood, CSF, and urine [J].
Pages, Melanie ;
Rotem, Denisse ;
Gydush, Gregory ;
Reed, Sarah ;
Rhoades, Justin ;
Ha, Gavin ;
Lo, Christopher ;
Fleharty, Mark ;
Duran, Madeleine ;
Jones, Robert ;
Becker, Sarah ;
Haller, Michaela ;
Sinai, Claire E. ;
Goumnerova, Liliana ;
Golub, Todd R. ;
Love, J. Christopher ;
Ligon, Keith L. ;
Wright, Karen D. ;
Adalsteinsson, Viktor A. ;
Beroukhim, Rameen ;
Bandopadhayay, Pratiti .
NEURO-ONCOLOGY, 2022, 24 (08) :1352-1363
[39]   Liquid Biopsy in Low-Grade Glioma: A Systematic Review and a Proposal for a Clinical Utility Score [J].
Zanin, Luca ;
Sachkova, Alexandra ;
Panciani, Pier Paolo ;
Rohde, Veit ;
Fontanella, Marco Maria ;
Schatlo, Bawarjan .
CELLULAR AND MOLECULAR NEUROBIOLOGY, 2023, 43 (08) :3833-3845
[40]   Battle of the biopsies: Role of tissue and liquid biopsy in hepatocellular carcinoma [J].
Lehrich, Brandon M. ;
Zhang, Josephine ;
Monga, Satdarshan P. ;
Dhanasekaran, Renumathy .
JOURNAL OF HEPATOLOGY, 2024, 80 (03) :515-530