A Population-Based Study of Autosomal-Recessive Disease-Causing Mutations in a Founder Population
被引:50
作者:
Chong, Jessica X.
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机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Chong, Jessica X.
[1
]
Ouwenga, Rebecca
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Ouwenga, Rebecca
[1
]
Anderson, Rebecca L.
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Anderson, Rebecca L.
[1
]
Waggoner, Darrel J.
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Pediat, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Waggoner, Darrel J.
[1
,2
]
Ober, Carole
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Obstet & Gynecol, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Ober, Carole
[1
,3
]
机构:
[1] Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
[2] Univ Chicago, Dept Pediat, Chicago, IL 60637 USA
[3] Univ Chicago, Dept Obstet & Gynecol, Chicago, IL 60637 USA
The decreasing cost of whole-genome and whole-exome sequencing has resulted in a renaissance for identifying Mendelian disease mutations, and for the first time it is possible to survey the distribution and characteristics of these mutations in large population samples. We conducted carrier screening for all autosomal-recessive (AR) mutations known to be present in members of a founder population and revealed surprisingly high carrier frequencies for many of these mutations. By utilizing the rich demographic, genetic, and phenotypic data available on these subjects and simulations in the exact pedigree that these individuals belong to, we show that the majority of mutations were most likely introduced into the population by a single founder and then drifted to the high carrier frequencies observed. We further show that although there is an increased incidence of AR diseases overall, the mean carrier burden is likely to be lower in the Hutterites than in the general population. Finally, on the basis of simulations, we predict the presence of 30 or more undiscovered recessive mutations among these subjects, and this would at least double the number of AR diseases that have been reported in this isolated population.
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Caliskan, Minal
Chong, Jessica X.
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机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Chong, Jessica X.
Uricchio, Lawrence
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Uricchio, Lawrence
Anderson, Rebecca
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Anderson, Rebecca
Chen, Peixian
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Chen, Peixian
Sougnez, Carrie
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h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Sougnez, Carrie
Garimella, Kiran
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h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Garimella, Kiran
Gabriel, Stacey B.
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h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Gabriel, Stacey B.
DePristo, Mark A.
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h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
DePristo, Mark A.
Shakir, Khalid
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h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Shakir, Khalid
Matern, Dietrich
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h-index: 0
机构:
Mayo Clin, Dept Lab Med & Pathol, Coll Med, Rochester, MN USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Matern, Dietrich
Das, Soma
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Das, Soma
Waggoner, Darrel
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Pediat, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Waggoner, Darrel
Nicolae, Dan L.
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h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Med, Chicago, IL 60637 USA
Univ Chicago, Dept Stat, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Nicolae, Dan L.
Ober, Carole
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Obstet & Gynecol, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Caliskan, Minal
Chong, Jessica X.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Chong, Jessica X.
Uricchio, Lawrence
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Uricchio, Lawrence
Anderson, Rebecca
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Anderson, Rebecca
Chen, Peixian
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Chen, Peixian
Sougnez, Carrie
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Sougnez, Carrie
Garimella, Kiran
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Garimella, Kiran
Gabriel, Stacey B.
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Gabriel, Stacey B.
DePristo, Mark A.
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
DePristo, Mark A.
Shakir, Khalid
论文数: 0引用数: 0
h-index: 0
机构:
Broad Inst MIT & Harvard, Cambridge, MA USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Shakir, Khalid
Matern, Dietrich
论文数: 0引用数: 0
h-index: 0
机构:
Mayo Clin, Dept Lab Med & Pathol, Coll Med, Rochester, MN USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Matern, Dietrich
Das, Soma
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Das, Soma
Waggoner, Darrel
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Pediat, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Waggoner, Darrel
Nicolae, Dan L.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Med, Chicago, IL 60637 USA
Univ Chicago, Dept Stat, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA
Nicolae, Dan L.
Ober, Carole
论文数: 0引用数: 0
h-index: 0
机构:
Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
Univ Chicago, Dept Obstet & Gynecol, Chicago, IL 60637 USAUniv Chicago, Dept Human Genet, Chicago, IL 60637 USA