The RNA-binding protein Gemin5 binds directly to the ribosome and regulates global translation

被引:53
作者
Francisco-Velilla, Rosario [1 ]
Fernandez-Chamorro, Javier [1 ]
Ramajo, Jorge [1 ]
Martinez-Salas, Encarnacion [1 ]
机构
[1] UAM, CSIC, Ctr Biol Mol Severo Ochoa, Nicolas Cabrera 1, Madrid 28049, Spain
关键词
MENTAL-RETARDATION PROTEIN; MESSENGER-RNA; SMN COMPLEX; WD-REPEAT; 80S RIBOSOME; DEPENDENT TRANSLATION; IRES ELEMENTS; IDENTIFICATION; INITIATION; SURVIVAL;
D O I
10.1093/nar/gkw702
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
RNA-binding proteins (RBPs) play crucial roles in all organisms. The protein Gemin5 harbors two functional domains. The N-terminal domain binds to snRNAs targeting them for snRNPs assembly, while the C-terminal domain binds to IRES elements through a non-canonical RNA-binding site. Here we report a comprehensive view of the Gemin5 interactome; most partners copurified with the N-terminal domain via RNA bridges. Notably, Gemin5 sediments with the subcellular ribosome fraction, and His-Gemin5 binds to ribosome particles via its N-terminal domain. The interaction with the ribosome was lost in F381A and Y474A Gemin5 mutants, but not in W14A and Y15A. Moreover, the ribosomal proteins L3 and L4 bind directly with Gemin5, and conversely, Gemin5 mutants impairing the binding to the ribosome are defective in the interaction with L3 and L4. The overall polysome profile was affected by Gemin5 depletion or overexpression, concomitant to an increase or a decrease, respectively, of global protein synthesis. Gemin5, and G5-Nter as well, were detected on the polysome fractions. These results reveal the ribosome-binding capacity of the N-ter moiety, enabling Gemin5 to control global protein synthesis. Our study uncovers a crosstalk between this protein and the ribosome, and provides support for the view that Gemin5 may control translation elongation.
引用
收藏
页码:8335 / 8351
页数:17
相关论文
共 68 条
[21]   Redefining the Translational Status of 80S Monosomes [J].
Heyer, Erin E. ;
Moore, Melissa J. .
CELL, 2016, 164 (04) :757-769
[22]   The Scanning Mechanism of Eukaryotic Translation Initiation [J].
Hinnebusch, Alan G. .
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 83, 2014, 83 :779-812
[23]   The role of disordered protein regions in the assembly of decapping complexes and RNP granules [J].
Jonas, Stefanie ;
Izaurralde, Elisa .
GENES & DEVELOPMENT, 2013, 27 (24) :2628-2641
[24]   IGF2 mRNA binding protein p62/IMP2-2 in hepatocellular carcinoma: antiapoptotic action is independent of IGF2/PI3K signaling [J].
Kessler, Sonja M. ;
Pokorny, Juliane ;
Zimmer, Vincent ;
Laggai, Stephan ;
Lammert, Frank ;
Bohle, Rainer M. ;
Kiemer, Alexandra K. .
AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY, 2013, 304 (04) :G328-G336
[25]   The fragile X mental retardation protein is associated with ribosomes [J].
Khandjian, EW ;
Corbin, F ;
Woerly, S ;
Rousseau, F .
NATURE GENETICS, 1996, 12 (01) :91-93
[26]   Structure of the human 80S ribosome [J].
Khatter, Heena ;
Myasnikov, Alexander G. ;
Natchiar, S. Kundhavai ;
Klaholz, Bruno P. .
NATURE, 2015, 520 (7549) :640-U338
[27]   A draft map of the human proteome [J].
Kim, Min-Sik ;
Pinto, Sneha M. ;
Getnet, Derese ;
Nirujogi, Raja Sekhar ;
Manda, Srikanth S. ;
Chaerkady, Raghothama ;
Madugundu, Anil K. ;
Kelkar, Dhanashree S. ;
Isserlin, Ruth ;
Jain, Shobhit ;
Thomas, Joji K. ;
Muthusamy, Babylakshmi ;
Leal-Rojas, Pamela ;
Kumar, Praveen ;
Sahasrabuddhe, Nandini A. ;
Balakrishnan, Lavanya ;
Advani, Jayshree ;
George, Bijesh ;
Renuse, Santosh ;
Selvan, Lakshmi Dhevi N. ;
Patil, Arun H. ;
Nanjappa, Vishalakshi ;
Radhakrishnan, Aneesha ;
Prasad, Samarjeet ;
Subbannayya, Tejaswini ;
Raju, Rajesh ;
Kumar, Manish ;
Sreenivasamurthy, Sreelakshmi K. ;
Marimuthu, Arivusudar ;
Sathe, Gajanan J. ;
Chavan, Sandip ;
Datta, Keshava K. ;
Subbannayya, Yashwanth ;
Sahu, Apeksha ;
Yelamanchi, Soujanya D. ;
Jayaram, Savita ;
Rajagopalan, Pavithra ;
Sharma, Jyoti ;
Murthy, Krishna R. ;
Syed, Nazia ;
Goel, Renu ;
Khan, Aafaque A. ;
Ahmad, Sartaj ;
Dey, Gourav ;
Mudgal, Keshav ;
Chatterjee, Aditi ;
Huang, Tai-Chung ;
Zhong, Jun ;
Wu, Xinyan ;
Shaw, Patrick G. .
NATURE, 2014, 509 (7502) :575-+
[28]   Gemin5-snRNA interaction reveals an RNA binding function for WD repeat domains [J].
Lau, Chi-kong ;
Bachorik, Jennifer L. ;
Dreyfuss, Gideon .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2009, 16 (05) :486-491
[29]   Rhythmic Interaction between Period1 mRNA and hnRNP Q Leads to Circadian Time-Dependent Translation [J].
Lee, Kyung-Ha ;
Woo, Kyung-Chul ;
Kim, Do-Yeon ;
Kim, Tae-Don ;
Shin, Jaecheon ;
Park, Sung Mi ;
Jang, Sung Key ;
Kim, Kyong-Tai .
MOLECULAR AND CELLULAR BIOLOGY, 2012, 32 (03) :717-728
[30]   WD-repeat proteins: structure characteristics, biological function, and their involvement in human diseases [J].
Li, D ;
Roberts, R .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2001, 58 (14) :2085-2097