Geomicrobiological linkages between short-chain alkane consumption and sulfate reduction rates in seep sediments

被引:28
作者
Bose, Arpita [1 ]
Rogers, Daniel R. [1 ]
Adams, Melissa M. [1 ]
Joye, Samantha B. [2 ]
Girguis, Peter R. [1 ]
机构
[1] Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA
[2] Univ Georgia, Dept Marine Sci, Athens, GA 30602 USA
来源
FRONTIERS IN MICROBIOLOGY | 2013年 / 4卷
基金
美国国家科学基金会;
关键词
short-chain alkanes; methane; ethane; propane; butane; Gulf of Mexico; microbial sulfate reduction; C-1-C-4; hydrocarbons; GULF-OF-MEXICO; 16S RIBOSOMAL-RNA; ANAEROBIC OXIDATION; REDUCING BACTERIA; COLD SEEPS; GAS HYDRATE; SPECTROPHOTOMETRIC DETERMINATION; PHYLOGENETIC ANALYSIS; MICROBIAL DIVERSITY; METHANE OXIDATION;
D O I
10.3389/fmicb.2013.00386
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Marine hydrocarbon seeps are ecosystems that are rich in methane, and, in some cases, short-chain (C-2-C-5) and longer alkanes. C-2-C-4 alkanes such as ethane, propane, and butane can be significant components of seeping fluids. Some sulfate-reducing microbes oxidize short-chain alkanes anaerobically, and may play an important role in both the competition for sulfate and the local carbon budget. To better understand the anaerobic oxidation of short-chain n-alkanes coupled with sulfate-reduction, hydrocarbon-rich sediments from the Gulf of Mexico (GoM) were amended with artificial, sulfate-replete seawater and one of four n-alkanes (C-1-C-4) then incubated under strict anaerobic conditions. Measured rates of alkane oxidation and sulfate reduction closely follow stoichiometric predictions that assume the complete oxidation of alkanes to CO2 (though other sinks for alkane carbon likely exist). Changes in the delta C-13 of all the alkanes in the reactors show enrichment over the course of the incubation, with the C-3 and C-4 incubations showing the greatest enrichment (4.4 and 4.5 parts per thousand, respectively). The concurrent depletion in the delta C-13 of dissolved inorganic carbon (DIC) implies a transfer of carbon from the alkane to the DIC pool (-3.5 and -6.7 parts per thousand for C-3 and C-4 incubations, respectively). Microbial community analyses reveal that certain members of the class Deltaproteobacteria are selectively enriched as the incubations degrade C-1-C-4 alkanes. Phylogenetic analyses indicate that distinct phylotypes are enriched in the ethane reactors, while phylotypes in the propane and butane reactors align with previously identified C-3-C-4 alkane-oxidizing sulfate-reducers. These data further constrain the potential influence of alkane oxidation on sulfate reduction rates (SRRs) in cold hydrocarbon-rich sediments, provide insight into their contribution to local carbon cycling, and illustrate the extent to which short-chain alkanes can serve as electron donors and govern microbial community composition and density.
引用
收藏
页数:13
相关论文
共 54 条
  • [1] Fine-scale phylogenetic architecture of a complex bacterial community
    Acinas, SG
    Klepac-Ceraj, V
    Hunt, DE
    Pharino, C
    Ceraj, I
    Distel, DL
    Polz, MF
    [J]. NATURE, 2004, 430 (6999) : 551 - 554
  • [2] Pyrosequencing analysis for characterization of soil bacterial populations as affected by an integrated livestock-cotton production system
    Acosta-Martinez, V.
    Dowd, S. E.
    Sun, Y.
    Wester, D.
    Allen, V.
    [J]. APPLIED SOIL ECOLOGY, 2010, 45 (01) : 13 - 25
  • [3] Anaerobic oxidation of short-chain alkanes in hydrothermal sediments: potential influences on sulfur cycling and microbial diversity
    Adams, Melissa M.
    Hoarfrost, Adrienne L.
    Bose, Arpita
    Joye, Samantha B.
    Girguis, Peter R.
    [J]. FRONTIERS IN MICROBIOLOGY, 2013, 4
  • [4] Microbiological investigation of methane- and hydrocarbon-discharging mud volcanoes in the Carpathian Mountains, Romania
    Alain, K
    Holler, T
    Musat, F
    Elvert, M
    Treude, T
    Krüger, M
    [J]. ENVIRONMENTAL MICROBIOLOGY, 2006, 8 (04) : 574 - 590
  • [5] The sulfur biogeochemistry of chemosynthetic cold seep communities, Gulf of Mexico, USA
    Arvidson, RS
    Morse, JW
    Joye, SB
    [J]. MARINE CHEMISTRY, 2004, 87 (3-4) : 97 - 119
  • [6] Atekwana EA, 1998, J HYDROL, V205, P265
  • [7] Weak coupling between sulfate reduction and the anaerobic oxidation of methane in methane-rich seafloor sediments during ex situ incubation
    Bowles, Marshall W.
    Samarkin, Vladimir A.
    Bowles, Kathy M.
    Joye, Samantha B.
    [J]. GEOCHIMICA ET COSMOCHIMICA ACTA, 2011, 75 (02) : 500 - 519
  • [8] Enzymes involved in the anaerobic oxidation of n-alkanes: from methane to long-chain paraffins
    Callaghan, Amy V.
    [J]. FRONTIERS IN MICROBIOLOGY, 2013, 4
  • [9] Animal evolution, bioturbation, and the sulfate concentration of the oceans
    Canfield, Donald E.
    Farquhar, James
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (20) : 8123 - 8127
  • [10] Overestimation of the Abundance of Sulfate-Reducing Bacteria in Human Feces by Quantitative PCR Targeting the Desulfovibrio 16S rRNA Gene
    Christophersen, C. T.
    Morrison, M.
    Conlon, M. A.
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2011, 77 (10) : 3544 - 3546