Sparkle/PM7 Lanthanide Parameters for the Modeling of Complexes and Materials

被引:116
作者
Dutra, Jose Diogo L. [1 ]
Filho, Manoel A. M. [1 ]
Rocha, Gerd B. [2 ]
Freire, Ricardo O. [1 ]
Simas, Alfredo M. [3 ]
Stewart, James J. P. [4 ]
机构
[1] Univ Fed Sergipe, Dept Quim, BR-49100000 Sao Cristovao, SE, Brazil
[2] Univ Fed Paraiba, Dept Quim, CCEN, BR-58059970 Joao Pessoa, PB, Brazil
[3] Univ Fed Pernambuco, Dept Quim Fundamental, BR-50740540 Recife, PE, Brazil
[4] Stewart Computat Chem, Colorado Springs, CO 80921 USA
关键词
CAMBRIDGE STRUCTURAL DATABASE; CHEMICAL AM1 CALCULATION; RARE-EARTH COMPLEXES; SEMIEMPIRICAL METHODS; COORDINATION-COMPOUNDS; NDDO APPROXIMATIONS; GROUND-STATES; PM6; METHOD; OPTIMIZATION; PREDICTION;
D O I
10.1021/ct301012h
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The recently published Parametric Method number 7, PM7, is the first semiempirical method to be successfully tested by modeling crystal structures and heats of formation of solids. PM7 is thus also capable of producing results of useful accuracy for materials science and constitutes a great improvement over its predecessor, PM6. In this article, we present Sparkle model parameters to be used with PM7 that allow the prediction of geometries of metal complexes and materials which contain lanthanide trications. Accordingly, we considered the geometries of 224 high-quality crystallographic structures of complexes for the parametrization set and 395 more for the validation of the parametrization for the whole lanthanide series, from La(III) to Lu(III). The average unsigned error for Sparkle/PM7 for the distances between the metal ion and its coordinating atoms is 0.063 angstrom for all lanthanides, ranging from a minimum of 0.052 angstrom for Tb(III) to 0.088 angstrom for Ce(III), comparable to the equivalent errors in the distances predicted by PM7 for other metals. These distance deviations follow a gamma distribution within a 95% level of confidence, signifying that they appear to be random around a mean, confirming that Sparkle/PM7 is a well-tempered method. We conclude by carrying out a Sparkle/PM7 full geometry optimization of two spatial groups of the same thulium-containing metal organic framework, with unit cells accommodating 376 atoms, of which 16 are Tm(III) cations; the optimized geometries were in good agreement with the crystallographic ones. These results emphasize the capability of the use of the Sparkle model for the prediction of geometries of compounds containing lanthanide trications within the PM7 semiempirical model, as well as the usefulness of such semiempirical calculations for materials modeling. Sparkle/PM7 is available in the software package MOPAC2012, at no cost for academics and can be obtained from http://openmopac.net.
引用
收藏
页码:3333 / 3341
页数:9
相关论文
共 72 条
[1]   The Cambridge Structural Database: a quarter of a million crystal structures and rising [J].
Allen, FH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 2002, 58 (3 PART 1) :380-388
[2]   Ligand design for functional metal-organic frameworks [J].
Almeida Paz, Filipe A. ;
Klinowski, Jacek ;
Vilela, Sergio M. F. ;
Tome, Joao P. C. ;
Cavaleiro, Jose A. S. ;
Rocha, Joao .
CHEMICAL SOCIETY REVIEWS, 2012, 41 (03) :1088-1110
[3]  
Andrade A. V. M., 1997, J ALLOY COMPD, V250, P412
[4]   Design of luminescent lanthanide complexes: From molecules to highly efficient photo-emitting materials [J].
Armelao, L. ;
Quici, S. ;
Barigelletti, F. ;
Accorsi, G. ;
Bottaro, G. ;
Cavazzini, M. ;
Tondello, E. .
COORDINATION CHEMISTRY REVIEWS, 2010, 254 (5-6) :487-505
[5]   Sparkle model for AM1 calculation of neodymium(III) coordination compounds [J].
Bastos, CC ;
Freire, RO ;
Rocha, GB ;
Simas, AM .
JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY A-CHEMISTRY, 2006, 177 (2-3) :225-237
[6]   3-phenyl-4-aroyl-5-isoxazolonate complexes of Tb3+ as promising light-conversion molecular devices [J].
Biju, S. ;
Reddy, M. L. P. ;
Freire, Ricardo O. .
INORGANIC CHEMISTRY COMMUNICATIONS, 2007, 10 (04) :393-396
[7]   New software for searching the Cambridge Structural Database and visualizing crystal structures [J].
Bruno, IJ ;
Cole, JC ;
Edgington, PR ;
Kessler, M ;
Macrae, CF ;
McCabe, P ;
Pearson, J ;
Taylor, R .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE CRYSTAL ENGINEERING AND MATERIALS, 2002, 58 :389-397
[8]   Lanthanide NIR luminescence for telecommunications, bioanalyses and solar energy conversion [J].
Buenzli, Jean-Claude G. ;
Eliseeva, Svetlana V. .
JOURNAL OF RARE EARTHS, 2010, 28 (06) :824-842
[9]   Lanthanide Luminescence for Biomedical Analyses and Imaging [J].
Buenzli, Jean-Claude G. .
CHEMICAL REVIEWS, 2010, 110 (05) :2729-2755
[10]   LUMINESCENT LANTHANIDE SENSORS [J].
Cable, Morgan L. ;
Levine, Dana J. ;
Kirby, James P. ;
Gray, Harry B. ;
Ponce, Adrian .
ADVANCES IN INORGANIC CHEMISTRY, VOL 63: INORGANIC PHOTOCHEMISTRY, 2011, 63 :1-45