Next-generation sequencing for the diagnosis of patients with congenital multiple anomalies and/or intellectual disabilities

被引:0
作者
Suga, Kenichi [1 ]
Imoto, Issei [2 ,3 ,4 ]
Ito, Hiromichi [1 ,5 ]
Naruto, Takuya [2 ]
Goji, Aya [1 ]
Osumi, Keita [1 ]
Tokaji, Narumi [1 ]
Homme, Yukako [1 ]
Ono, Akemi [1 ]
Ichihara, Yuko [1 ]
Shono, Miki [1 ]
Mori, Tatsuo [1 ]
Urushihara, Maki [1 ]
Nakagawa, Ryuji [1 ]
Hayabuchi, Yasunobu [1 ]
Kagami, Shoji [1 ]
机构
[1] Tokushima Univ Hosp, Dept Pediat, 2-50-1 Kuramotocho, Tokushima, Tokushima 7708503, Japan
[2] Tokushima Univ, Grad Sch Biomed Sci, Dept Human Genet, Grad Sch, Tokushima, Japan
[3] Aichi Canc Ctr, Div Mol Genet, Res Inst, Nagoya, Aichi, Japan
[4] Nagoya Univ, Dept Canc Genet, Grad Sch Med, Nagoya, Aichi, Japan
[5] Naruto Univ Educ, Grad Sch Educ, Dept Special Needs Educ, Naruto, Japan
关键词
next-generation sequencing; targeted panel sequencing; multiple congenital anomalies; intellectual disability;
D O I
暂无
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Background : In clinical practice, a large proportion of patients with multiple congenital anomalies and/or intellectual disabilities (MCA / ID) lacks a specific diagnosis. Recently, next-generation sequencing (NGS) has become an efficient strategy for genetic diagnosis of patients with MCA/ID. Objective : To review the utility of NGS for the diagnosis of patients with MCA /ID. Method : Patients with MCA/ID were recruited between 2013 and 2017. Molecular diagnosis was performed using NGS-based targeted panel sequencing for 4,813 genes. Promising causative variants underwent confirmation by Sanger sequencing or chromosomal microarray. Results : Eighteen patients with MCA/ID were enrolled in this study. Of them, 8 cases (44%) were diagnosed by targeted panel sequencing. Most of diagnosed patients were able to receive better counseling and more appropriate medical management. Conclusion : NGS-based targeted panel sequencing seems to be an effective testing strategy for diagnosis of patients with MCA/ID. J. Med. Invest. 67: 246-249, August, 2020
引用
收藏
页码:246 / 249
页数:4
相关论文
共 12 条
[1]   Sequencing-based diagnostics for pediatric genetic diseases: progress and potential [J].
Abou Tayoun, Ahmad N. ;
Krock, Bryan ;
Spinner, Nancy B. .
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS, 2016, 16 (09) :987-999
[2]   The clinical utility of next-generation sequencing in the neonatal intensive care unit [J].
Bowdin, Sarah C. .
CANADIAN MEDICAL ASSOCIATION JOURNAL, 2016, 188 (11) :786-787
[3]   Massively Parallel Sequencing of Patients with Intellectual Disability, Congenital Anomalies and/or Autism Spectrum Disorders with a Targeted Gene Panel [J].
Brett, Maggie ;
McPherson, John ;
Zang, Zhi Jiang ;
Lai, Angeline ;
Tan, Ee-Shien ;
Ng, Ivy ;
Ong, Lai-Choo ;
Cham, Breana ;
Tan, Patrick ;
Rozen, Steve ;
Tan, Ene-Choo .
PLOS ONE, 2014, 9 (04)
[4]   Targeted Next-Generation Sequencing Analysis of 1,000 Individuals with Intellectual Disability [J].
Grozeva, Detelina ;
Carss, Keren ;
Spasic-Boskovic, Olivera ;
Tejada, Maria-Isabel ;
Gecz, Jozef ;
Shaw, Marie ;
Corbett, Mark ;
Haan, Eric ;
Thompson, Elizabeth ;
Friend, Kathryn ;
Hussain, Zaamin ;
Hackett, Anna ;
Field, Michael ;
Renieri, Alessandra ;
Stevenson, Roger ;
Schwartz, Charles ;
Floyd, James A. B. ;
Bentham, Jamie ;
Cosgrove, Catherine ;
Keavney, Bernard ;
Bhattacharya, Shoumo ;
Hurles, Matthew ;
Raymond, F. Lucy .
HUMAN MUTATION, 2015, 36 (12) :1197-1204
[5]   A novel frameshift mutation of CHD7 in a Japanese patient with CHARGE syndrome [J].
Kohmoto T. ;
Shono M. ;
Naruto T. ;
Watanabe M. ;
Suga K.-I. ;
Nakagawa R. ;
Kagami S. ;
Masuda K. ;
Imoto I. .
Human Genome Variation, 3 (1)
[6]   A 16q22.2-q23.1 deletion identified in a male infant with West syndrome [J].
Mori, Tatsuo ;
Goji, Aya ;
Toda, Yoshihiro ;
Ito, Hiromichi ;
Mori, Kenji ;
Kohmoto, Tomohiro ;
Imoto, Issei ;
Kagami, Shoji .
BRAIN & DEVELOPMENT, 2019, 41 (10) :888-893
[7]   Simultaneous Detection of Both Single Nucleotide Variations and Copy Number Alterations by Next-Generation Sequencing in Gorlin Syndrome [J].
Morita, Kei-ichi ;
Naruto, Takuya ;
Tanimoto, Kousuke ;
Yasukawa, Chisato ;
Oikawa, Yu ;
Masuda, Kiyoshi ;
Imoto, Issei ;
Inazawa, Johji ;
Omura, Ken ;
Harada, Hiroyuki .
PLOS ONE, 2015, 10 (11)
[8]   A rare male patient with classic Rett syndrome caused by MeCP2_e1 mutation [J].
Tokaji, Narumi ;
Ito, Hiromichi ;
Kohmoto, Tomohiro ;
Naruto, Takuya ;
Takahashi, Rizu ;
Goji, Aya ;
Mori, Tatsuo ;
Toda, Yoshihiro ;
Saito, Masako ;
Tange, Shoichiro ;
Masuda, Kiyoshi ;
Kagami, Shoji ;
Imoto, Issei .
AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2018, 176 (03) :699-702
[9]   New insights and advances in CHARGE syndrome: Diagnosis, etiologies, treatments, and research discoveries [J].
van Ravenswaaij-Arts, Conny ;
Martin, Donna M. .
AMERICAN JOURNAL OF MEDICAL GENETICS PART C-SEMINARS IN MEDICAL GENETICS, 2017, 175 (04) :397-406
[10]   Detection of 1p36 deletion by clinical exome-first diagnostic approach [J].
Watanabe M. ;
Hayabuchi Y. ;
Ono A. ;
Naruto T. ;
Horikawa H. ;
Kohmoto T. ;
Masuda K. ;
Nakagawa R. ;
Ito H. ;
Kagami S. ;
Imoto I. .
Human Genome Variation, 3 (1)