Multiomics Integration Reveals the Landscape of Prometastasis Metabolism in Hepatocellular Carcinoma

被引:24
作者
Li, Yongmei [1 ,2 ]
Zhuang, Hao [1 ,2 ,5 ]
Zhang, Xinran [1 ,2 ]
Li, Yuan [1 ,2 ]
Liu, Yun [1 ,2 ]
Yi, Xianfu [3 ]
Qin, Guoxuan [4 ]
Wei, Wen [6 ]
Chen, Ruibing [1 ,2 ]
机构
[1] Tianjin Med Univ, Dept Genet, Sch Basic Med Sci, Tianjin 300070, Peoples R China
[2] Tianjin Med Univ, Dept Pathogen Biol, Sch Basic Med Sci, Tianjin 300070, Peoples R China
[3] Tianjin Med Univ, Sch Biomed Engn, Tianjin 300070, Peoples R China
[4] Tianjin Univ, Sch Elect Informat Engn, Tianjin 300070, Peoples R China
[5] Zhengzhou Univ, Dept Hepat Biliary Pancreat Surg, Canc Hosp, Zhengzhou 450003, Henan, Peoples R China
[6] Chongqing Univ, Sch Life Sci, Chongqing 400044, Peoples R China
基金
中国国家自然科学基金;
关键词
PYRUVATE-KINASE M2; TUMOR-METASTASIS; OXIDATIVE STRESS; CANCER; THERAPY; ESTABLISHMENT; CHEMOTHERAPY; ASSOCIATION; GLUTATHIONE; EXPRESSION;
D O I
10.1074/mcp.RA118.000586
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The systematic investigation of gene mutation and expression is important to discover novel biomarkers and therapeutic targets in cancers. Here, we integrated genomics, transcriptomics, proteomics, and metabolomics to analyze three hepatocellular carcinoma (HCC) cell lines with differential metastatic potentials. The results revealed the profile of the prometastasis metabolism potentially associated with HCC metastasis. The multiomic analysis identified 12 genes with variations at multiple levels from three metabolic pathways, including glycolysis, starch, and sucrose metabolism, and glutathione metabolism. Furthermore, uridine diphosphate (UDP)-glucose pyrophosphorylase 2 (UGP2), was observed to be persistently up-regulated with increased metastatic potential. UGP2 overexpression promoted cell migration and invasion and enhanced glycogenesis in vitro. The role of UGP2 in metastasis was further confirmed using a tumor xenograft mouse model. Taken together, the compendium of multiomic data provides valuable insights in understanding the roles of shifted cellular metabolism in HCC metastasis.
引用
收藏
页码:607 / 618
页数:12
相关论文
共 45 条
  • [1] A method and server for predicting damaging missense mutations
    Adzhubei, Ivan A.
    Schmidt, Steffen
    Peshkin, Leonid
    Ramensky, Vasily E.
    Gerasimova, Anna
    Bork, Peer
    Kondrashov, Alexey S.
    Sunyaev, Shamil R.
    [J]. NATURE METHODS, 2010, 7 (04) : 248 - 249
  • [2] GLUT1 Expression Is Increased in Hepatocellular Carcinoma and Promotes Tumorigenesis
    Amann, Thomas
    Maegdefrau, Ulrike
    Hartmann, Arndt
    Agaimy, Abbas
    Marienhagen, Joerg
    Weiss, Thomas S.
    Stoeltzing, Oliver
    Warnecke, Christina
    Schoelmerich, Juergen
    Oefner, Peter J.
    Kreutz, Marina
    Bosserhoff, Anja K.
    Hellerbrand, Claus
    [J]. AMERICAN JOURNAL OF PATHOLOGY, 2009, 174 (04) : 1544 - 1552
  • [3] Trimmomatic: a flexible trimmer for Illumina sequence data
    Bolger, Anthony M.
    Lohse, Marc
    Usadel, Bjoern
    [J]. BIOINFORMATICS, 2014, 30 (15) : 2114 - 2120
  • [4] Co-expression of PKM2 and TRIM35 predicts survival and recurrence in hepatocellular carcinoma
    Chen, Zhiao
    Lu, Xinyuan
    Wang, Zhichao
    Jin, Guangzhi
    Wang, Qifeng
    Chen, Di
    Chen, Taoyang
    Li, Jinjun
    Fan, Jia
    Cong, Wenming
    Gao, Qiang
    He, Xianghuo
    [J]. ONCOTARGET, 2015, 6 (04) : 2539 - 2548
  • [5] Rheostatic CD44 isoform expression and its association with oxidative stress in human malignant mesothelioma
    Chew, Shan Hwu
    Okazaki, Yasumasa
    Akatsuka, Shinya
    Wang, Shenqi
    Jiang, Li
    Ohara, Yuuki
    Ito, Fumiya
    Saya, Hideyuki
    Sekido, Yoshitaka
    Toyokuni, Shinya
    [J]. FREE RADICAL BIOLOGY AND MEDICINE, 2017, 106 : 91 - 99
  • [6] Chemotherapy and target therapy for hepatocellular carcinoma: New advances and challenges
    Deng, Gan-Lu
    Zeng, Shan
    Shen, Hong
    [J]. WORLD JOURNAL OF HEPATOLOGY, 2015, 7 (05) : 787 - 798
  • [7] Systemic therapy for advanced hepatocellular carcinoma: an update
    Desai, Jasmin Radhika
    Ochoa, Sebastian
    Prins, Petra Alexandra
    He, Aiwu Ruth
    [J]. JOURNAL OF GASTROINTESTINAL ONCOLOGY, 2017, 8 (02) : 243 - 255
  • [8] Targeting lactate metabolism for cancer therapeutics
    Doherty, Joanne R.
    Cleveland, John L.
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 2013, 123 (09) : 3685 - 3692
  • [9] Cancer incidence and mortality worldwide: Sources, methods and major patterns in GLOBOCAN 2012
    Ferlay, Jacques
    Soerjomataram, Isabelle
    Dikshit, Rajesh
    Eser, Sultan
    Mathers, Colin
    Rebelo, Marise
    Parkin, Donald Maxwell
    Forman, David
    Bray, Freddie
    [J]. INTERNATIONAL JOURNAL OF CANCER, 2015, 136 (05) : E359 - E386
  • [10] Role of pyruvate kinase M2 in transcriptional regulation leading to epithelial-mesenchymal transition
    Hamabe, Atsushi
    Konno, Masamitsu
    Tanuma, Nobuhiro
    Shima, Hiroshi
    Tsunekuni, Kenta
    Kawamoto, Koichi
    Nishida, Naohiro
    Koseki, Jun
    Mimori, Koshi
    Gotoh, Noriko
    Yamamoto, Hirofumi
    Doki, Yuichiro
    Mori, Masaki
    Ishii, Hideshi
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2014, 111 (43) : 15526 - 15531