Off-lattice pattern recognition scheme for kinetic Monte Carlo simulations

被引:17
|
作者
Nandipati, Giridhar [1 ]
Kara, Abdelkader [1 ]
Shah, Syed Islamuddin [1 ]
Rahman, Talat S. [1 ]
机构
[1] Univ Cent Florida, Dept Phys, Orlando, FL 32816 USA
关键词
Self learning; Off lattice; Kinetic Monte Carlo; Pattern recognition; Surface diffusion; Thin film growth; EPITAXIAL-GROWTH; MOLECULAR-DYNAMICS; DIFFUSION; SURFACES; CU(100); GE; CU;
D O I
10.1016/j.jcp.2011.12.029
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
We report the development of a pattern-recognition scheme for the off-lattice self-learning kinetic Monte Carlo (KMC) method, one that is simple and flexible enough that it can be applied to all types of surfaces. In this scheme, to uniquely identify the local environment and associated processes involving three-dimensional (3D) motion of an atom or atoms, space around a central atom is divided into 3D rectangular boxes. The dimensions and the number of 3D boxes are determined by the accuracy with which a process needs to be identified and a process is described as the central atom moving to a neighboring vacant box accompanied by the motion of any other atom or atoms in its surrounding boxes. As a test of this method to we apply it to examine the decay of 3D Cu islands on the Cu(100) and to the surface diffusion of a Cu monomer and a dimer on Cu(111) and compare the results and computational efficiency to those available in the literature. (C) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:3548 / 3560
页数:13
相关论文
共 50 条
  • [21] OFF-LATTICE MONTE-CARLO SIMULATIONS OF POLYMER MELTS CONFINED BETWEEN 2 PLATES
    KUMAR, SK
    VACATELLO, M
    YOON, DY
    JOURNAL OF CHEMICAL PHYSICS, 1988, 89 (08): : 5206 - 5215
  • [22] Influence of the Brownian step size in off-lattice Monte Carlo simulations of irreversible particle aggregation
    M. Rottereau
    J. C. Gimel
    T. Nicolai
    D. Durand
    The European Physical Journal E, 2005, 18 : 15 - 19
  • [23] The Linked Neighbour List (LNL) method for fast off-lattice Monte Carlo simulations of fluids
    Mazzeo, M. D.
    Ricci, M.
    Zannoni, C.
    COMPUTER PHYSICS COMMUNICATIONS, 2010, 181 (03) : 569 - 581
  • [24] An off-lattice, self-learning kinetic Monte Carlo method using local environments
    Konwar, Dhrubajit
    Bhute, Vijesh J.
    Chatterjee, Abhijit
    JOURNAL OF CHEMICAL PHYSICS, 2011, 135 (17):
  • [25] Off-Lattice Monte Carlo Simulation of Supramolecular Polymer Architectures
    Amuasi, H. E.
    Storm, C.
    PHYSICAL REVIEW LETTERS, 2010, 105 (24)
  • [26] OFF-LATTICE MONTE-CARLO SIMULATIONS OF CONFINED POLYMER MELTS - APPLICATIONS TO PRACTICAL SYSTEMS
    KUMAR, SK
    RUSSELL, TP
    YOON, DY
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1990, 200 : 258 - POLY
  • [27] Influence of the Brownian step size in off-lattice Monte Carlo simulations of irreversible particle aggregation
    Rottereau, M
    Gimel, JC
    Nicolai, T
    Durand, D
    EUROPEAN PHYSICAL JOURNAL E, 2005, 18 (01): : 15 - 19
  • [28] MONTE-CARLO SIMULATIONS OF OFF-LATTICE POLYMERS (VOL 7, PG 3089, 1995)
    GRASSBERGER, P
    HEGGER, R
    JOURNAL OF PHYSICS-CONDENSED MATTER, 1995, 7 (40) : 7889 - 7889
  • [29] The Material Point Monte Carlo model: A discrete, off-lattice method for microstructural evolution simulations
    Goins, Philip E.
    Holm, Elizabeth A.
    COMPUTATIONAL MATERIALS SCIENCE, 2016, 124 : 411 - 419
  • [30] Polypeptide folding with off-lattice Monte Carlo dynamics: The method
    Hoffmann, D
    Knapp, EW
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 1996, 24 (06): : 387 - 403