Pruning the tree of life: k-Core percolation as selection mechanism

被引:15
作者
Klimek, Peter [1 ]
Thurner, Stefan [1 ,2 ]
Hanel, Rudolf [1 ]
机构
[1] Med Univ Vienna, HNO, Comp Syst Res Grp, A-1090 Vienna, Austria
[2] Santa Fe Inst, Santa Fe, NM 87501 USA
关键词
Evolution dynamics; Co-evolution; Fitness landscapes; Mass extinctions; Critical phenomena; MODEL; CRITICALITY; EXTINCTION; EVOLUTION;
D O I
10.1016/j.jtbi.2008.09.030
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
We propose a model for evolution aiming to reproduce statistical features of fossil data, in particular the distributions of extinction events, the distribution of species per genus and the distribution of lifetimes, all of which are known to be of power-law type. The model incorporates both species-species interactions and ancestral relationships. The main novelty of this work is to show the feasibility of k-core percolation as a selection mechanism. We give theoretical predictions for the observable distributions, confirm their validity by computer simulation and compare with fossil data. A key feature of the proposed model is a co-evolving fitness landscape determined by the topology of the underlying species interactions, ecological niches emerge naturally. The predicted distributions are independent of the rate of speciation, i.e. whether one adopts an gradualist or punctuated view of evolution. (C) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:142 / 146
页数:5
相关论文
共 17 条
[1]   PUNCTUATED EQUILIBRIUM AND CRITICALITY IN A SIMPLE-MODEL OF EVOLUTION [J].
BAK, P ;
SNEPPEN, K .
PHYSICAL REVIEW LETTERS, 1993, 71 (24) :4083-4086
[2]   Speciation in the fossil record [J].
Benton, MJ ;
Pearson, PN .
TRENDS IN ECOLOGY & EVOLUTION, 2001, 16 (07) :405-411
[3]  
CLAUSET A, 2007, ARXIV07061062PHYSICS
[4]  
COROMINASMURTRA B, 2007, ARXIV07120512V1CONDM
[5]   The onset of selection [J].
de Duve, C .
NATURE, 2005, 433 (7026) :581-582
[6]   k-core (bootstrap) percolation on complex networks:: Critical phenomena and nonlocal effects [J].
Goltsev, A. V. ;
Dorogovtsev, S. N. ;
Mendes, J. F. F. .
PHYSICAL REVIEW E, 2006, 73 (05)
[7]   Phase transition in random catalytic networks [J].
Hanel, R ;
Kauffman, SA ;
Thurner, S .
PHYSICAL REVIEW E, 2005, 72 (03)
[8]   Towards a physics of evolution: Critical diversity dynamics at the edges of collapse and bursts of diversification [J].
Hanel, Rudolf ;
Kauffman, Stuart A. ;
Thurner, Stefan .
PHYSICAL REVIEW E, 2007, 76 (03)
[9]   A model for the emergence of cooperation, interdependence, and Structure in evolving networks [J].
Jain, S ;
Krishna, S .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (02) :543-547
[10]  
KAUFFMAN SA, 1993, ORIGINNS ORDER SELF