Association of miR-502-binding site single nucleotide polymorphism in the 3-untranslated region of SET8 and TP53 codon 72 polymorphism with non-small cell lung cancer in Chinese population

被引:39
作者
Yang, Shaodi [1 ]
Guo, Haiyan [2 ]
Wei, Benjie [1 ]
Zhu, Shengcui [1 ]
Cai, Yanlin [3 ]
Jiang, Pei [1 ]
Tang, Jianxin [1 ]
机构
[1] Hunan Univ Technol, Key Lab Green Packaging & Applicat Biol Nanotechn, Zhuzhou 412007, Peoples R China
[2] Xian 4 Hosp, Dept Obstet & Gynecol, Xian 710004, Peoples R China
[3] Nanhua Univ, Affiliated Hosp 1, Hengyang 421001, Peoples R China
基金
中国国家自然科学基金;
关键词
SET8; tp53; polymorphism; non-small cell lung cancer; 3' UNTRANSLATED REGION; MIR-502; BINDING-SITE; HISTONE METHYLTRANSFERASE; GENE; P53; SUSCEPTIBILITY; METHYLATION; PR-SET7; ALLELE; CYCLE;
D O I
10.1093/abbs/gmt138
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The objective of this study was to identify whether the miR-502-binding site single nucleotide polymorphism (SNP) in the 3-untranslated region (3-UTR) of set domain-containing protein 8 (SET8) and the tumor protein p53 (TP53) codon 72 polymorphism were associated with the risk for non-small cell lung cancer (NSCLC), either independently or jointly, among Chinese people from southern Han. The genotypes of SET8 and TP53 codon 72 polymorphisms of peripheral blood DNA were detected using polymerase chain reaction-restriction fragment length polymorphism and direct DNA sequencing in a casecontrol study on 164 NSCLC cases and 199 controls. The SET8 TT (odds ratio, OR 2.173, 95 confidence interval, CI 1.0454.517) or TP53 GG (OR 2.579, 95 CI 1.3664.870) genotype was associated with an increased risk of NSCLC by comparing with the SET8 CC or TP53 CC genotype, respectively. Similar results were obtained in SET8 recessive model (OR 2.074, 95 CI 1.0194.221, P 0.05), and the dominant and recessive model of TP53 codon 72 were performed, respectively (OR 1.809, 95 CI 1.1592.825, P 0.05; OR 1.933, 95 CI 1.0963.409, P 0.05). In addition, interaction between the SET8 and TP53 polymorphisms increased the risk of NSCLC in a multiply manner, with the OR being 3.032 (95CI 1.5805.816) for subjects carrying both SET8 TT and TP53 GG genotypes. Therefore, the miR-502-binding site SNP in the 3-UTR of SET8 and the TP53 codon 72 polymorphism may be markers of genetic susceptibility to NSCLC in Chinese population, and there is a possible genegene interaction in the incidence of NSCLC.
引用
收藏
页码:149 / 154
页数:6
相关论文
共 25 条
[1]  
Aranda MDB, 2013, EUR J HOSP PHARM, V20, P120
[2]   PR-Set7 and H4K20me1: at the crossroads of genome integrity, cell cycle, chromosome condensation, and transcription [J].
Beck, David B. ;
Oda, Hisanobu ;
Shen, Steven S. ;
Reinberg, Danny .
GENES & DEVELOPMENT, 2012, 26 (04) :325-337
[3]   Polymorphisms in microRNA targets: a gold mine for molecular epidemiology [J].
Chen, Kexin ;
Song, Fengju ;
Calin, George A. ;
Wei, Qingyi ;
Hao, Xishan ;
Zhang, Wei .
CARCINOGENESIS, 2008, 29 (07) :1306-1311
[4]   A polymorphism at the miR-502 binding site in the 3′ untranslated region of the SET8 gene is associated with the outcome of small-cell lung cancer [J].
Ding, Cuimin ;
Li, Ruijuan ;
Peng, Jingcui ;
Li, Shengmian ;
Guo, Zhanjun .
EXPERIMENTAL AND THERAPEUTIC MEDICINE, 2012, 3 (04) :689-692
[5]   A polymorphism at the miR-502 binding site in the 3′-untranslated region of the histone methyltransferase SET8 is associated with hepatocellular carcinoma outcome [J].
Guo, Zhanjun ;
Wu, Chensi ;
Wang, Xiaoling ;
Wang, Cuiju ;
Zhang, Ruixing ;
Shan, Baoen .
INTERNATIONAL JOURNAL OF CANCER, 2012, 131 (06) :1318-1322
[6]   The p53 codon 72 Proline allele is associated with p53 gene mutations in non-small cell lung cancer [J].
Hu, YC ;
McDermott, MP ;
Ahrendt, SA .
CLINICAL CANCER RESEARCH, 2005, 11 (07) :2502-2509
[7]   Infection of human papillomavirus type 18 and p53 codon 72 polymorphism in lung cancer patients from India [J].
Jain, N ;
Singh, V ;
Hedau, S ;
Kumar, S ;
Daga, MK ;
Dewan, R ;
Murthy, NS ;
Husain, SA ;
Das, BC .
CHEST, 2005, 128 (06) :3999-4007
[8]   Role of p53 and p21 polymorphisms in the risk of cervical cancer among Chinese women [J].
Jiang, Pei ;
Liu, Jianxin ;
Li, Wen ;
Zeng, Xiaoxi ;
Tang, Jianxin .
ACTA BIOCHIMICA ET BIOPHYSICA SINICA, 2010, 42 (09) :671-676
[9]   The histone methyltransferase SET8 is required for S-phase progression [J].
Jorgensen, Stine ;
Elvers, Ingegerd ;
Trelle, Morten Beck ;
Menzel, Tobias ;
Eskildsen, Morten ;
Jensen, Ole Norregaard ;
Helleday, Thomas ;
Helin, Kristian ;
Sorensen, Claus Storgaard .
JOURNAL OF CELL BIOLOGY, 2007, 179 (07) :1337-1345
[10]   SET8 is degraded via PCNA-coupled CRL4(CDT2) ubiquitylation in S phase and after UV irradiation [J].
Jorgensen, Stine ;
Eskildsen, Morten ;
Fugger, Kasper ;
Hansen, Lisbeth ;
Larsen, Marie Sofie Yoo ;
Kousholt, Arne Nedergaard ;
Syljuasen, Randi G. ;
Trelle, Morten Beck ;
Jensen, Ole Norregaard ;
Helin, Kristian ;
Sorensen, Claus Storgaard .
JOURNAL OF CELL BIOLOGY, 2011, 192 (01) :43-54