Beyond ribosomal DNA: On towards the telomere

被引:11
作者
Gonzalez, IL [1 ]
Sylvester, JE [1 ]
机构
[1] ALLEGHENY UNIV HLTH SCI,MED COLL PENN HAHNEMANN SCH MED,DEPT PATHOL,BROAD & VINE,PHILADELPHIA,PA 19102
关键词
D O I
10.1007/s004120050204
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have sequenced and analyzed 8.3 kb of sequence adjacent and distal to the human ribosomal DNA (rDNA); this distal sequence connects to the rDNA cluster just 4 kb upstream of the first promoter and is shared among the acrocentric chromosomes and, at least in part, it is also present in other primates. The sequence differs in character from that of the rDNA intergenic spacer (IGS) in that it does not contain long stretches of either polypyrimidine or polypurine. However, just like the IGS, it contains numerous repetitive elements, including retroposed fragments of 28S rRNA and large pieces of the IGS. In addition, we show that the rDNA clusters are not interrupted by other sequences and do not recombine with this distal segment.
引用
收藏
页码:431 / 437
页数:7
相关论文
共 32 条
[1]   MOUSE RDNA NON-TRANSCRIBED SPACER SEQUENCES ARE FOUND FLANKING IMMUNOGLOBULIN-CH GENES AND ELSEWHERE THROUGHOUT THE GENOME [J].
ARNHEIM, N ;
SEPERACK, P ;
BANERJI, J ;
LANG, RB ;
MIESFELD, R ;
MARCU, KB .
CELL, 1980, 22 (01) :179-185
[2]   MOLECULAR EVIDENCE FOR GENETIC EXCHANGES AMONG RIBOSOMAL GENES ON NON-HOMOLOGOUS CHROMOSOMES IN MAN AND APES [J].
ARNHEIM, N ;
KRYSTAL, M ;
SCHMICKEL, R ;
WILSON, G ;
RYDER, O ;
ZIMMER, E .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1980, 77 (12) :7323-7327
[3]   RFLP and physical mapping with an rDNA-specific endonuclease reveals that nucleolus organizer regions of Arabidopsis thaliana adjoin the telomeres on chromosomes 2 and 4 [J].
Copenhaver, GP ;
Pikaard, CS .
PLANT JOURNAL, 1996, 9 (02) :259-272
[4]   PURIFICATION OF CPG ISLANDS USING A METHYLATED DNA-BINDING COLUMN [J].
CROSS, SH ;
CHARLTON, JA ;
NAN, XS ;
BIRD, AP .
NATURE GENETICS, 1994, 6 (03) :236-244
[5]   REARRANGEMENT AND POSSIBLE AMPLIFICATION OF THE RIBOSOMAL-RNA GENE SITES IN THE HUMAN CHRONIC MYELOGENOUS LEUKEMIA-CELL LINE-K562 [J].
CROSSEN, PE ;
GODWIN, JM .
CANCER GENETICS AND CYTOGENETICS, 1985, 18 (01) :27-30
[6]   EXTRA-RIBOSOMAL SPACER SEQUENCES IN TRITURUS [J].
DELUCCHINI, S ;
ANDRONICO, F ;
ANDREAZZOLI, M ;
GIULIANI, M ;
SAVINO, R ;
NARDI, I .
JOURNAL OF MOLECULAR BIOLOGY, 1988, 204 (04) :805-813
[7]   THE RDNA OF C-ELEGANS - SEQUENCE AND STRUCTURE [J].
ELLIS, RE ;
SULSTON, JE ;
COULSON, AR .
NUCLEIC ACIDS RESEARCH, 1986, 14 (05) :2345-2364
[8]   Incognito rRNA and rDNA in databases and libraries [J].
Gonzalez, IL ;
Sylvester, JE .
GENOME RESEARCH, 1997, 7 (01) :65-70
[9]  
GONZALEZ IL, 1989, MOL BIOL EVOL, V6, P413
[10]   COMPLETE SEQUENCE OF THE 43-KB HUMAN RIBOSOMAL DNA REPEAT - ANALYSIS OF THE INTERGENIC SPACER [J].
GONZALEZ, IL ;
SYLVESTER, JE .
GENOMICS, 1995, 27 (02) :320-328