Conserved RNA Helicase FRH Acts Nonenzymatically to Support the Intrinsically Disordered Neurospora Clock Protein FRQ

被引:68
作者
Hurley, Jennifer M. [1 ]
Larrondo, Luis F. [3 ]
Loros, Jennifer J. [1 ,2 ]
Dunlap, Jay C. [1 ]
机构
[1] Geisel Sch Med Dartmouth, Dept Genet, Hanover, NH 03755 USA
[2] Geisel Sch Med Dartmouth, Dept Biochem, Hanover, NH 03755 USA
[3] Pontificia Univ Catolica Chile, Fac Ciencias Biol, Dept Genet Mol & Microbiol, Santiago, Chile
关键词
WHITE-COLLAR COMPLEX; CIRCADIAN CLOCK; MUTATIONAL ANALYSIS; FEEDBACK LOOP; PHOSPHORYLATION; FREQUENCY; REVEALS; DEGRADATION; STABILITY; EVOLUTION;
D O I
10.1016/j.molcel.2013.11.005
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein conformation dictates a great deal of protein function. A class of naturally unstructured proteins, termed intrinsically disordered proteins (IDPs), demonstrates that flexibility in structure can be as important mechanistically as rigid structure. At the core of the circadian transcription/translation feedback loop in Neurospora crassa is the protein FREQUENCY (FRQ), shown here shown to share many characteristics of IDPs. FRQ in turn binds to FREQUENCY-Interacting RNA Helicase (FRH), whose clock function has been assumed to relate to its predicted helicase function. However, mutational analyses reveal that the helicase function of FRH is not essential for the clock, and a region of FRH distinct from the helicase region is essential for stabilizing FRQ against rapid degradation via a pathway distinct from its typical ubiquitin-mediated turnover. These data lead to the hypothesis that FRQ is an IDP and that FRH acts nonenzymatically, stabilizing FRQ to enable proper clock circuitry/function.
引用
收藏
页码:832 / 843
页数:12
相关论文
共 65 条
[51]   The diversity and evolution of circadian clock proteins in fungi [J].
Salichos, Leonidas ;
Rokas, Antonis .
MYCOLOGIA, 2010, 102 (02) :269-278
[52]   Protein disorder - a breakthrough invention of evolution? [J].
Schlessinger, Avner ;
Schaefer, Christian ;
Vicedo, Esmeralda ;
Schmidberger, Markus ;
Punta, Marco ;
Rost, Burkhard .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2011, 21 (03) :412-418
[53]  
Shi M., 2008, THESIS DARTMOUTH COL, P145
[54]   FRQ-Interacting RNA Helicase Mediates Negative and Positive Feedback in the Neurospora Circadian Clock [J].
Shi, Mi ;
Collett, Michael ;
Loros, Jennifer J. ;
Dunlap, Jay C. .
GENETICS, 2010, 184 (02) :351-U70
[55]   Insights into the evolution of the nucleolus by an analysis of its protein domain repertoire [J].
Staub, E ;
Fiziev, P ;
Rosenthal, A ;
Hinzmann, B .
BIOESSAYS, 2004, 26 (05) :567-581
[56]   Setting the pace of the Neurospora circadian clock by multiple independent FRQ phosphorylation events [J].
Tang, Chi-Tai ;
Li, Shaojie ;
Long, Chengzu ;
Cha, Joonseok ;
Huang, Guocun ;
Li, Lily ;
Chen, She ;
Liu, Yi .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (26) :10722-10727
[57]  
Tantos Agnes, 2012, Methods Mol Biol, V896, P215, DOI 10.1007/978-1-4614-3704-8_13
[58]   Intrinsically disordered proteins: a 10-year recap [J].
Tompa, Peter .
TRENDS IN BIOCHEMICAL SCIENCES, 2012, 37 (12) :509-516
[59]   Operational definition of intrinsically unstructured protein sequences based on susceptibility to the 20S proteasome [J].
Tsvetkov, Peter ;
Asher, Gad ;
Paz, Aviv ;
Reuven, Nina ;
Sussman, Joel L. ;
Silman, Israel ;
Shaul, Yosef .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2008, 70 (04) :1357-1366
[60]   The nanny model for IDPs [J].
Tsvetkov, Peter ;
Reuven, Nina ;
Shaul, Yosef .
NATURE CHEMICAL BIOLOGY, 2009, 5 (11) :778-781