Association of single nucleotide polymorphisms in the RAB5B gene 3′UTR region with polycystic ovary syndrome in Chinese Han women

被引:2
作者
Yu, Jia [1 ]
Ding, Caifei [1 ]
Guan, Siqi [2 ]
Wang, Chenye [1 ]
机构
[1] Hangzhou Red Cross Hosp, ZheJiang Chinese Med & Western Med Integrated Hos, Reprod Dept, Hangzhou, Zhejiang, Peoples R China
[2] Beijing Univ Chinese Med, Clin Med Coll 1, 11 North Third Ring East Rd, Beijing, Peoples R China
关键词
GENOME-WIDE ASSOCIATION; TGF-BETA FAMILY; PATHOGENESIS; ENVIRONMENT; MICRORNAS; ETIOLOGY; PATHWAYS; PCOS; LOCI;
D O I
10.1042/BSR20190292
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Objective: Previous genome-wide sequencing revealed that Ras-related protein Rab-5B (RAB5B) is a susceptible target in patients with polycystic ovary syndrome (PCOS). Methods: Direct sequencing was performed to analyze the RAB5B gene rs1045435, rs11550558, rs34962186, rs705700, rs58717357, rs11171718, rs60028217, rs772920 loci genotypes in 300 PCOS patients and 300 healthy controls. The plasma microRNA (miRNA)-24, miR-320 levels weremeasured by reverse transcription fluorescent quantitative PCR (RT-qPCR). Results: The risk of PCOS in C allele carriers of RAB5B gene rs1045435 locus was 3.91 times higher than that of G allele. The risk of PCOS in rs11550558 locus G allele was 4.09 times higher than A allele. The risk of PCOS in rs705700 locus C allele was 1.66 times greater than T allele. The risk of PCOS in rs11171718 locus A allele carrier was 3.84 times higher than G allele. The rs11550558 SNP was associated with PCOS risk only in those with age >= 31.1 years. And RAB5B gene rs11550558, rs1045435, and rs11171718 SNPs were significantly associated with PCOS risk only in subjects with BMI >= 23.8 kg/m(2). We also found that the RAB5B gene rs1045435 SNP was associated with plasma miR-24 levels. The RAB5B gene rs11550558, rs705700, rs11171718 SNPs were correlated with plasma miR-230 levels. Conclusion: The single nucleotide polymorphisms of the rs1045435, rs11550558, rs705700, and rs11171718 loci of the RAB5B gene are associated with PCOS risk. The rs1045435 locus is likely an miR-24 binding site, while rs11550558, rs705700, and rs11171718 loci may be miR-320 binding sites.
引用
收藏
页数:13
相关论文
共 44 条
[21]   Association of ATG5 Gene Polymorphisms With Behcet's Disease and ATG10 Gene Polymorphisms With VKH Syndrome in a Chinese Han Population [J].
Zheng, Minming ;
Yu, Hongsong ;
Zhang, Lijun ;
Li, Hua ;
Liu, Yunjia ;
Kijlstra, Aize ;
Yang, Peizeng .
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2015, 56 (13) :8280-8287
[22]   Polymorphisms and haplotypes of insulin-like factor 3 gene are associated with risk of polycystic ovary syndrome in Indian women [J].
Shaikh, Nuzhat ;
Dadachanji, Roshan ;
Meherji, Pervin ;
Shah, Nalini ;
Mukherjee, Srabani .
GENE, 2016, 577 (02) :180-186
[23]   Association Study of Single Nucleotide Polymorphisms in XRCC1 Gene with Risk of Hepatocellular Carcinoma in Chinese Han Population [J].
Bi, Jingwang ;
Zhong, Chen ;
Li, Kainan ;
Chu, Huili ;
Wang, Baocheng .
BIOMED RESEARCH INTERNATIONAL, 2013, 2013
[24]   Association between Interleukin-32 and Interleukin-17A Single Nucleotide Polymorphisms and Serum Levels with Polycystic Ovary Syndrome [J].
Hesampour, Fatemeh ;
Jahromi, Bahia Namavar ;
Tahmasebi, Foroozan ;
Gharesi-Fard, Behrouz .
IRANIAN JOURNAL OF ALLERGY ASTHMA AND IMMUNOLOGY, 2019, 18 (01) :91-99
[25]   Association analysis of B7-H3 and B7-H4 gene single nucleotide polymorphisms in susceptibility to ankylosing spondylitis in eastern Chinese Han population [J].
Chen, Yuting ;
Yang, Hui ;
Xu, Shanshan ;
Shen, Jiran ;
Xu, Wei ;
Shao, Ming ;
Pan, Faming .
INTERNATIONAL JOURNAL OF IMMUNOGENETICS, 2021, 48 (06) :500-509
[26]   Association of anthropometric, androgenic and insulin-related features with polymorphisms in exon 8 of SHBG gene in women with polycystic ovary syndrome [J].
Hacihanefioglu, Burak ;
Aybey, Bekir ;
Ozon, Yavuz Hakan ;
Berkil, Hakan ;
Karsidag, Kubilay .
GYNECOLOGICAL ENDOCRINOLOGY, 2013, 29 (04) :361-364
[27]   Analysis of Single Nucleotide Polymorphisms of STK32B, PPARGC1A and CTNNA3 Gene With Sporadic Parkinson's Disease Susceptibility in Chinese Han Population [J].
Shi, Chang-he ;
Cheng, Yuan ;
Tang, Mi-bo ;
Liu, Yu-tao ;
Yang, Zhi-hua ;
Li, Fang ;
Fan, Yu ;
Yang, Jing ;
Xu, Yu-ming .
FRONTIERS IN NEUROLOGY, 2018, 9
[28]   Genetic association of polymorphisms at the intergenic region between PRDM1 and ATG5 with hepatitis B virus infection in Han Chinese patients [J].
Li, Na ;
Fan, Xiude ;
Wang, Xiaoyun ;
Zhang, Xiaoge ;
Zhang, Kun ;
Han, Qunying ;
Lv, Yi ;
Liu, Zhengwen .
JOURNAL OF MEDICAL VIROLOGY, 2020, 92 (08) :1198-1205
[29]   A Candidate Gene Study for the Association of Host Single Nucleotide Polymorphisms with Liver Cirrhosis Risk in Chinese Hepatitis B Patients [J].
Peng, Lijun ;
Guo, Jinsheng ;
Zhang, Zhe ;
Liu, Lili ;
Cao, Yirong ;
Shi, Hong ;
Wang, Jian ;
Wang, Jiyao ;
Friedman, Scott L. ;
Sninsky, John J. .
GENETIC TESTING AND MOLECULAR BIOMARKERS, 2013, 17 (09) :681-686
[30]   Association between long-chain non-coding RNASRA1gene single-nucleotide polymorphism and polycystic ovary syndrome susceptibility. [J].
Tan, Jifan ;
Hao, XiuLan ;
Zhao, TingTing ;
Ying, JianLan ;
Li, Tian ;
Cheng, Li .
JOURNAL OF ASSISTED REPRODUCTION AND GENETICS, 2020, 37 (10) :2513-2523