Ribosomal Protein Rps26 Influences 80S Ribosome Assembly in Saccharomyces cerevisiae

被引:9
作者
Belyy, Alexander [1 ,2 ]
Levanova, Nadezhda [1 ]
Tabakova, Irina [1 ]
Rospert, Sabine [3 ,4 ]
Belyi, Yury [1 ,5 ]
机构
[1] Gamaleya Res Ctr, Dept Bacterial Infect, Moscow, Russia
[2] Lomonosov Moscow State Univ, Fac Biol, Moscow, Russia
[3] Albert Ludwig Univ Freiburg, Inst Biochem & Mol Biol, Freiburg, Germany
[4] Univ Freiburg, BIOSS Ctr Biol Signaling Studies, Freiburg, Germany
[5] Albert Ludwig Univ Freiburg, FRIAS Freiburg Inst Adv Studies, Freiburg, Germany
关键词
40S subunit; Saccharomyces cerevisiae; eukaryote-specific motif; mutagenesis; ribosomal protein; ribosome assembly; translation initiation; yeast genetics; SITE-DIRECTED MUTAGENESIS; DIAMOND-BLACKFAN ANEMIA; MESSENGER-RNA; EUKARYOTIC RIBOSOME; SHUTTLE VECTORS; YEAST; S26; SUBUNIT; TRANSLATION; COMPLEX;
D O I
10.1128/mSphere.00109-15
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The eukaryotic ribosome consists of a small (40S) and a large (60S) subunit. Rps26 is one of the essential ribosomal proteins of the 40S subunit and is encoded by two almost identical genes, RPS26a and RPS26b. Previous studies demonstrated that Rps26 interacts with the 5' untranslated region of mRNA via the eukaryote-specific 62-YXXPKXYXK-70 (Y62-K70) motif. Those observations suggested that this peptide within Rps26 might play an important and specific role during translation initiation. By using alanine-scanning mutagenesis and engineered strains of the yeast Saccharomyces cerevisiae, we found that single amino acid substitutions within the Y62-K70 motif of Rps26 did not affect the in vivo function of the protein. In contrast, complete deletion of the Y62-K70 segment was lethal. The simultaneous replacement of five conserved residues within the Y62-K70 segment by alanines resulted in growth defects under stress conditions and produced distinct changes in polysome profiles that were indicative of the accumulation of free 60S subunits. Human Rps26 (Rps26-Hs), which displays significant homology with yeast Rps26, supported the growth of an S. cerevisiae.rps26a.rps26b strain. However, the.rps26a.rps26b double deletion strain expressing Rps26-Hs displayed substantial growth defects and an altered ratio of 40S/60S ribosomal subunits. The combined data strongly suggest that the eukaryote-specific motif within Rps26 does not play a specific role in translation initiation. Rather, the data indicate that Rps26 as a whole is necessary for proper assembly of the 40S subunit and the 80S ribosome in yeast. IMPORTANCE Rps26 is an essential protein of the eukaryotic small ribosomal subunit. Previous experiments demonstrated an interaction between the eukaryotespecific Y62-K70 segment of Rps26 and the 5' untranslated region of mRNA. The data suggested a specific role of the Y62-K70 motif during translation initiation. Here, we report that single-site substitutions within the Y62-K70 peptide did not affect the growth of engineered yeast strains, arguing against its having a critical role during translation initiation via specific interactions with the 5' untranslated region of mRNA molecules. Only the simultaneous replacement of five conserved residues within the Y62-K70 fragment or the replacement of the yeast protein with the human homolog resulted in growth defects and caused significant changes in polysome profiles. The results expand our knowledge of ribosomal protein function and suggest a role of Rps26 during ribosome assembly in yeast.
引用
收藏
页数:11
相关论文
共 59 条
[1]   Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome [J].
Armache, Jean-Paul ;
Jarasch, Alexander ;
Anger, Andreas M. ;
Villa, Elizabeth ;
Becker, Thomas ;
Bhushan, Shashi ;
Jossinet, Fabrice ;
Habeck, Michael ;
Dindar, Guelcin ;
Franckenberg, Sibylle ;
Marquez, Viter ;
Mielke, Thorsten ;
Thomm, Michael ;
Berninghausen, Otto ;
Beatrix, Birgitta ;
Soeding, Johannes ;
Westhof, Eric ;
Wilson, Daniel N. ;
Beckmann, Roland .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (46) :19754-19759
[2]   Lost to translation: when autophagy targets mature ribosomes [J].
Beau, Isabelle ;
Esclatine, Audrey ;
Codogno, Patrice .
TRENDS IN CELL BIOLOGY, 2008, 18 (07) :311-314
[3]   Elongation Factor 1A Is the Target of Growth Inhibition in Yeast Caused by Legionella pneumophila Glucosyltransferase Lgt1 [J].
Belyi, Yury ;
Tartakovskaya, Dina ;
Tais, Arlette ;
Fitzke, Edith ;
Tzivelekidis, Tina ;
Jank, Thomas ;
Rospert, Sabine ;
Aktories, Klaus .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (31) :26029-26037
[4]   The Structure of the Eukaryotic Ribosome at 3.0 Å Resolution [J].
Ben-Shem, Adam ;
de Loubresse, Nicolas Garreau ;
Melnikov, Sergey ;
Jenner, Lasse ;
Yusupova, Gulnara ;
Yusupov, Marat .
SCIENCE, 2011, 334 (6062) :1524-1529
[5]  
BOEKE JD, 1987, METHOD ENZYMOL, V154, P164
[6]   Site-directed mutagenesis of yeast eEF1A - Viable mutants with altered nucleotide specificity [J].
Cavallius, J ;
Merrick, WC .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (44) :28752-28758
[7]   Ribosomal protein mutations in Korean patients with Diamond-Blackfan anemia [J].
Chae, Hyojin ;
Park, Joonhong ;
Lee, Seungok ;
Kim, Myungshin ;
Kim, Yonggoo ;
Lee, Jae-Wook ;
Chung, Nack-Gyun ;
Cho, Bin ;
Jeong, Dae Chul ;
Kim, Jiyeon ;
Kim, Jung Rok ;
Park, Geon .
EXPERIMENTAL AND MOLECULAR MEDICINE, 2014, 46 :e88-e88
[8]   Release Factor eRF3 Mediates Premature Translation Termination on Polylysine-Stalled Ribosomes in Saccharomyces cerevisiae [J].
Chiabudini, Marco ;
Tais, Arlette ;
Zhang, Ying ;
Hayashi, Sachiko ;
Woelfle, Tina ;
Fitzke, Edith ;
Rospert, Sabine .
MOLECULAR AND CELLULAR BIOLOGY, 2014, 34 (21) :4062-4076
[9]   A Convergence of rRNA and mRNA Quality Control Pathways Revealed by Mechanistic Analysis of Nonfunctional rRNA Decay [J].
Cole, Sarah E. ;
LaRiviere, Frederick J. ;
Merrikh, Christopher N. ;
Moore, Melissa J. .
MOLECULAR CELL, 2009, 34 (04) :440-450
[10]  
COLLATZ E, 1977, J BIOL CHEM, V252, P9071