Complete genome sequence of the NVSL BoHV-1.1 Cooper reference strain

被引：23

作者：

d'Offay, Jean M. ^{[1
]}

Fulton, Robert W. ^{[1
]}

Eberle, R. ^{[1
]}

机构：

[1] Oklahoma State Univ, Ctr Vet Hlth Sci, Dept Vet Pathobiol, Stillwater, OK 74078 USA

来源：

ARCHIVES OF VIROLOGY | 2013年 / 158卷 / 05期

关键词：

BOVINE HERPESVIRUS-1; GENE;

D O I：

10.1007/s00705-012-1574-6

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

The only complete genome sequence available for bovine herpesvirus 1 (BoHV-1) is a composite sequence derived from four different BoHV-1.1 strains and one BoHV-1.2 strain. Such a chimeric genome sequence is problematic for molecular genetic studies on this virus. We report here the complete genome sequence for the BoHV-1.1 NVSL reference strain Cooper. Although similar to the published chimeric genome sequence, there are a number of nucleotide substitutions and deletions/insertions across the genome, many of which affect coding sequences.

引用

页码：1109 / 1113

页数：5

共 15 条

[11] BICP22 OF BOVINE HERPESVIRUS-1 IS ENCODED BY A SPLICED 1-CENTER-DOT-7 KB RNA WHICH EXHIBITS IMMEDIATE-EARLY AND LATE TRANSCRIPTION KINETICS [J].

SCHWYZER, M ;

WIRTH, UV ;

VOGT, B ;

FRAEFEL, C .

JOURNAL OF GENERAL VIROLOGY, 1994, 75 :1703-1711

[12]

Schwyzer M, 2010, BOVINE HERPESVIRUS T

[13] Rapid whole-genome mutational profiling using next-generation sequencing technologies [J].

Smith, Douglas R. ;

Quinlan, Aaron R. ;

Peckham, Heather E. ;

Makowsky, Kathryn ;

Tao, Wei ;

Woolf, Betty ;

Shen, Lei ;

Donahue, William F. ;

Tusneem, Nadeem ;

Stromberg, Michael P. ;

Stewart, Donald A. ;

Zhang, Lu ;

Ranade, Swati S. ;

Warner, Jason B. ;

Lee, Clarence C. ;

Coleman, Brittney E. ;

Zhang, Zheng ;

McLaughlin, Stephen F. ;

Malek, Joel A. ;

Sorenson, Jon M. ;

Blanchard, Alan P. ;

Chapman, Jarrod ;

Hillman, David ;

Chen, Feng ;

Rokhsar, Daniel S. ;

McKernan, Kevin J. ;

Jeffries, Thomas W. ;

Marth, Gabor T. ;

Richardson, Paul M. .

GENOME RESEARCH, 2008, 18 (10) :1638-1642

[14] NEW METHOD FOR ISOLATION OF HERPES-SIMPLEX VIRUS TYPE-2 DNA [J].

WALBOOMERS, JMM ;

SCHEGGET, JT .

VIROLOGY, 1976, 74 (01) :256-258

[15] IMMEDIATE-EARLY RNA-2.9 AND EARLY RNA-2.6 OF BOVINE HERPESVIRUS-1 ARE 3' COTERMINAL AND ENCODE A PUTATIVE ZINC FINGER TRANSACTIVATOR PROTEIN [J].

WIRTH, UV ;

FRAEFEL, C ;

VOGT, B ;

VLCEK, C ;

PACES, V ;

SCHWYZER, M .

JOURNAL OF VIROLOGY, 1992, 66 (05) :2763-2772

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