GATA2 and Progesterone Receptor Interaction in Endometrial Stromal Cells Undergoing Decidualization

被引:18
作者
Kohlmeier, Amanda [1 ]
Sison, Christia Angela M. [1 ]
Yilmaz, Bahar D. [1 ]
Coon, John S. [1 ]
Dyson, Matthew [1 ]
Bulun, Serdar E. [1 ]
机构
[1] Northwestern Univ, Feinberg Sch Med, Dept Obstet & Gynecol, Div Reprod Sci Med, Chicago, IL 60611 USA
关键词
progesterone; endometrium; differentiation; WNT; p38MAPK; JNK; GENE-EXPRESSION; TRANSCRIPTION FACTORS; SPORADIC MONOCYTOPENIA; AUTOSOMAL-DOMINANT; READ ALIGNMENT; MICE LACKING; MUTATIONS; HEMATOPOIESIS; ONTOLOGY; PATHWAY;
D O I
10.1210/endocr/bqaa070
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
The transcription factor GATA2 is important for endometrial stromal cell decidualization in early pregnancy. Progesterone receptor (PGR) is also critical during decidualization but its interaction with GATA2 in regulating genes and pathways necessary for decidualization in human endometrium are unclear. RNA-sequencing (RNA-seq) was performed to compare gene expression profiles (n = 3), and chromatin immunoprecipitation followed by sequencing (ChIP-seq) using an antibody against GATA2 (n = 2) was performed to examine binding to target genes in human endometrial stromal cells undergoing in vitro decidualization (IVD including estrogen, progestin, and 3',5'-cyclic AMP analogue) or vehicle treatment. We identified 1232 differentially expressed genes (DEGs) in IVD vs vehicle. GATA2 cistrome in IVD-treated cells was enriched with motifs for GATA, ATF, and JUN, and gene ontology analysis of GATA2 cistrome revealed pathways that regulate cholesterol storage, p38 mitogen-activated protein kinase, and the c-Jun N-terminal kinase cascades. Integration of RNA-seq and ChIP-seq data revealed that the PGR motif is highly enriched at GATA2 binding regions surrounding upregulated genes in IVD-treated cells. The integration of a mined public PGR cistrome in IVD-treated human endometrial cells with our GATA2 cistrome showed that GATA2 binding was significantly enhanced at PGR-binding regions in IVD vs vehicle. Interrogating 2 separate ChIP-seq data sets together with RNA-seq revealed integration of GATA2 and PGR action to coregulate biologic processes during decidualization of human endometrial stromal cells, specifically via WNT activation and stem cell differentiation pathways. These findings reveal the key pathways that are coactivated by GATA2 and PGR that may be therapeutic targets for supporting implantation and early pregnancy.
引用
收藏
页数:9
相关论文
共 48 条
  • [1] Gene Ontology: tool for the unification of biology
    Ashburner, M
    Ball, CA
    Blake, JA
    Botstein, D
    Butler, H
    Cherry, JM
    Davis, AP
    Dolinski, K
    Dwight, SS
    Eppig, JT
    Harris, MA
    Hill, DP
    Issel-Tarver, L
    Kasarskis, A
    Lewis, S
    Matese, JC
    Richardson, JE
    Ringwald, M
    Rubin, GM
    Sherlock, G
    [J]. NATURE GENETICS, 2000, 25 (01) : 25 - 29
  • [2] Expansion of the Gene Ontology knowledgebase and resources
    Carbon, S.
    Dietze, H.
    Lewis, S. E.
    Mungall, C. J.
    Munoz-Torres, M. C.
    Basu, S.
    Chisholm, R. L.
    Dodson, R. J.
    Fey, P.
    Thomas, P. D.
    Mi, H.
    Muruganujan, A.
    Huang, X.
    Poudel, S.
    Hu, J. C.
    Aleksander, S. A.
    McIntosh, B. K.
    Renfro, D. P.
    Siegele, D. A.
    Antonazzo, G.
    Attrill, H.
    Brown, N. H.
    Marygold, S. J.
    McQuilton, P.
    Ponting, L.
    Millburn, G. H.
    Rey, A. J.
    Stefancsik, R.
    Tweedie, S.
    Falls, K.
    Schroeder, A. J.
    Courtot, M.
    Osumi-Sutherland, D.
    Parkinson, H.
    Roncaglia, P.
    Lovering, R. C.
    Foulger, R. E.
    Huntley, R. P.
    Denny, P.
    Campbell, N. H.
    Kramarz, B.
    Patel, S.
    Buxton, J. L.
    Umrao, Z.
    Deng, A. T.
    Alrohaif, H.
    Mitchell, K.
    Ratnaraj, F.
    Omer, W.
    Rodriguez-Lopez, M.
    [J]. NUCLEIC ACIDS RESEARCH, 2017, 45 (D1) : D331 - D338
  • [3] Genome-wide analysis of estrogen receptor binding sites
    Carroll, Jason S.
    Meyer, Clifford A.
    Song, Jun
    Li, Wei
    Geistlinger, Timothy R.
    Eeckhoute, Jerome
    Brodsky, Alexander S.
    Keeton, Erika Krasnickas
    Fertuck, Kirsten C.
    Hall, Giles F.
    Wang, Qianben
    Bekiranov, Stefan
    Sementchenko, Victor
    Fox, Edward A.
    Silver, Pamela A.
    Gingeras, Thomas R.
    Liu, X. Shirley
    Brown, Myles
    [J]. NATURE GENETICS, 2006, 38 (11) : 1289 - 1297
  • [4] Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1
    Carroll, JS
    Liu, XS
    Brodsky, AS
    Li, W
    Meyer, CA
    Szary, AJ
    Eeckhoute, J
    Shao, WL
    Hestermann, EV
    Geistlinger, TR
    Fox, EA
    Silver, PA
    Brown, M
    [J]. CELL, 2005, 122 (01) : 33 - 43
  • [5] Pituitary-specific Gata2 knockout:: Effects on gonadotrope and thyrotrope function
    Charles, Michael A.
    Saunders, Thomas L.
    Wood, William M.
    Owens, Kailey
    Parlow, A. F.
    Camper, Sally A.
    Ridgway, E. C.
    Gordon, David F.
    [J]. MOLECULAR ENDOCRINOLOGY, 2006, 20 (06) : 1366 - 1377
  • [6] Non-Overlapping Progesterone Receptor Cistromes Contribute to Cell-Specific Transcriptional Outcomes
    Clarke, Christine L.
    Graham, J. Dinny
    [J]. PLOS ONE, 2012, 7 (04):
  • [7] Regulation of GREB1 transcription by estrogen receptor α through a multipartite enhancer spread over 20 kb of upstream flanking sequences
    Deschenes, Julie
    Bourdeau, Veronique
    White, John H.
    Mader, Sylvie
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (24) : 17335 - 17339
  • [8] Failure of Decidualization and Maternal Immune Tolerance Underlies Uterovascular Resistance in Intra Uterine Growth Restriction
    Dunk, Caroline
    Kwan, Melissa
    Hazan, Aleah
    Walker, Sierra
    Wright, Julie K.
    Harris, Lynda K.
    Jones, Rebecca Lee
    Keating, Sarah
    Kingdom, John C. P.
    Whittle, Wendy
    Maxwells, Cynthia
    Lye, Stephen J.
    [J]. FRONTIERS IN ENDOCRINOLOGY, 2019, 10
  • [9] Genome-Wide DNA Methylation Analysis Predicts an Epigenetic Switch for GATA Factor Expression in Endometriosis
    Dyson, Matthew T.
    Roqueiro, Damian
    Monsivais, Diana
    Ercan, C. Mutlu
    Pavone, Mary Ellen
    Brooks, David C.
    Kakinuma, Toshiyuki
    Ono, Masanori
    Jafari, Nadereh
    Dai, Yang
    Bulun, Serdar E.
    [J]. PLOS GENETICS, 2014, 10 (03):
  • [10] Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    Edgar, R
    Domrachev, M
    Lash, AE
    [J]. NUCLEIC ACIDS RESEARCH, 2002, 30 (01) : 207 - 210