Generalized-ensemble Monte Carlo method for systems with rough energy landscape

被引:116
作者
Hansmann, UHE
Okamoto, Y
机构
[1] Department of Theoretical Studies, Institute for Molecular Science, Okazaki, Aichi
来源
PHYSICAL REVIEW E | 1997年 / 56卷 / 02期
关键词
D O I
10.1103/PhysRevE.56.2228
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
We present a Monte Carlo algorithm which enhances equilibrization of low-temperature simulations and allows sampling of configurations over a large range of energies. The method is based on a non-Boltzmann probability weight factor and is another version of the so-called generalized-ensemble techniques. The effectiveness of the approach is demonstrated for the system of a small peptide, an example of the frustrated system with a rugged energy landscape.
引用
收藏
页码:2228 / 2233
页数:6
相关论文
共 23 条
[1]   Generalized simulated annealing algorithms using Tsallis statistics: Application to conformational optimization of a tetrapeptide [J].
Andricioaei, I ;
Straub, JE .
PHYSICAL REVIEW E, 1996, 53 (04) :R3055-R3058
[2]  
Berg B. A., 1992, International Journal of Modern Physics C (Physics and Computers), V3, P1083, DOI 10.1142/S0129183192000713
[3]   GROUND-STATE PROPERTIES OF THE 3-DIMENSIONAL ISING SPIN-GLASS [J].
BERG, BA ;
HANSMANN, UE ;
CELIK, T .
PHYSICAL REVIEW B, 1994, 50 (22) :16444-16452
[4]   NEW APPROACH TO SPIN-GLASS SIMULATIONS [J].
BERG, BA ;
CELIK, T .
PHYSICAL REVIEW LETTERS, 1992, 69 (15) :2292-2295
[5]   MULTICANONICAL ENSEMBLE - A NEW APPROACH TO SIMULATE 1ST-ORDER PHASE-TRANSITIONS [J].
BERG, BA ;
NEUHAUS, T .
PHYSICAL REVIEW LETTERS, 1992, 68 (01) :9-12
[6]  
FERRENBERG AM, 1989, PHYS REV LETT, V63, P1658, DOI 10.1103/PhysRevLett.63.1658.2
[7]   NEW MONTE-CARLO TECHNIQUE FOR STUDYING PHASE-TRANSITIONS [J].
FERRENBERG, AM ;
SWENDSEN, RH .
PHYSICAL REVIEW LETTERS, 1988, 61 (23) :2635-2638
[8]  
Hansmann UHE, 1997, J COMPUT CHEM, V18, P920, DOI 10.1002/(SICI)1096-987X(199705)18:7<920::AID-JCC5>3.0.CO
[9]  
2-T
[10]   COMPARATIVE-STUDY OF MULTICANONICAL AND SIMULATED ANNEALING ALGORITHMS IN THE PROTEIN-FOLDING PROBLEM [J].
HANSMANN, UHE ;
OKAMOTO, Y .
PHYSICA A, 1994, 212 (3-4) :415-437