The complete mitochondrial genome of the Chrysoperla sinica (Tjeder)

被引:0
作者
Li, Zhao-Qun [1 ,2 ]
Zhang, Shuai [2 ]
Luo, Jun-Yu [2 ]
Wang, Si-Bao [1 ,2 ]
Wang, Chun-Yi [2 ]
Lv, Li-Min [2 ]
Dong, Shuang-Lin [1 ]
Cui, Jin-Jie [2 ]
机构
[1] Nanjing Agr Univ, Coll Plant Protect, Key Lab Integrated Management Crop Dis & Pests, Educ Minist, Nanjing, Jiangsu, Peoples R China
[2] Chinese Acad Agr Sci, Inst Cotton Res, State Key Lab Cotton Biol, Anyang, Henan, Peoples R China
基金
中国国家自然科学基金;
关键词
Chrysoperla sinica; Chrysopidae; mitochondrial genome; TRANSFER-RNA GENES; PROGRAM; CHRYSOPIDAE; NEUROPTERA; PHYLOGENY; SEQUENCES;
D O I
10.3109/19401736.2014.1003842
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete mitochondrial genome of the Chrysoperla sinica was sequenced in this study. It is 16,057 bp in length, and contains 22 transfer RNA genes, 13 protein-coding genes (PCGs), 2 rRNA genes and 1 non-coding AT-rich region. But, C. sinica lack long tandem repeats. The Chrysoperla sinica mitogenome displays a very high level of similarity (99.27%) with Chrysoperla nipponensis. The genome base composition is 39.24% A, 39.70% T, 11.98% C, and 9.08% G. Similar to other insects, all PCGs are initiated by a typical ATN codon, except COX1, which starts with TCG. Nine PCGs have the standard, complete stop codon (TAA or TAG), and the other four PCGs end with the incomplete stop codon (TA or T).
引用
收藏
页码:4059 / 4060
页数:2
相关论文
共 14 条
  • [1] Bai Yao-yu, 2005, Acta Phytophylacica Sinica, V32, P225
  • [2] Tandem repeats finder: a program to analyze DNA sequences
    Benson, G
    [J]. NUCLEIC ACIDS RESEARCH, 1999, 27 (02) : 573 - 580
  • [3] Brooks S.J., 1994, Bulletin of the Natural History Museum Entomology Series, V63, P137
  • [4] A mitochondrial genome phylogeny of Diptera: whole genome sequence data accurately resolve relationships over broad timescales with high precision
    Cameron, Stephen L.
    Lambkin, Christine L.
    Barker, Stephen C.
    Whiting, Michael F.
    [J]. SYSTEMATIC ENTOMOLOGY, 2007, 32 (01) : 40 - 59
  • [5] Coates BS, 2014, MITOCHONDR DNA, V20, P1
  • [6] Complete mitochondrial genomes of two green lacewings, Chrysoperla nipponensis (Okamoto, 1914) and Apochrysa matsumurae Okamoto, 1912 (Neuroptera: Chrysopidae)
    Haruyama, Naoto
    Mochizuki, Atsushi
    Sato, Yukie
    Naka, Hideshi
    Nomura, Masashi
    [J]. MOLECULAR BIOLOGY REPORTS, 2011, 38 (05) : 3367 - 3373
  • [7] The complete mitochondrial genome of Chrysopa pallens (Insecta, Neuroptera, Chrysopidae)
    He, Kun
    Chen, Zhe
    Yu, Dan-Na
    Zhang, Jia-Yong
    [J]. MITOCHONDRIAL DNA, 2012, 23 (05): : 373 - 375
  • [8] ARWEN:: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences
    Laslett, Dean
    Canback, Bjorn
    [J]. BIOINFORMATICS, 2008, 24 (02) : 172 - 175
  • [9] tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    Lowe, TM
    Eddy, SR
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (05) : 955 - 964
  • [10] The complete mitochondrial genome of Gonepteryx rhamni (Lepidoptera: Pieridae: Coliadinae)
    Wang, Yunliang
    Peng, Chaomin
    Yao, Quanlin
    Shi, Qinghui
    Hao, Jiasheng
    [J]. MITOCHONDRIAL DNA, 2015, 26 (05): : 791 - 792