Identification and expression analysis of HSF transcription factor family in wild jujube under heat stress

被引:2
作者
Zhang, H. [1 ,2 ,3 ]
Jin, J. [3 ]
Fan, D. Y. [3 ]
Zhao, X. M. [3 ]
Jia, P. P. [1 ,2 ,3 ]
Hao, Q. [3 ]
Yang, L. [3 ]
Niu, J. X. [1 ,2 ]
机构
[1] Shihezi Univ, Dept Hort, Coll Agr, Shihezi 832003, Xinjiang, Peoples R China
[2] Xinjiang Prod & Construct Crops Key Lab Special F, Shihezi 832003, Xinjiang, Peoples R China
[3] Xinjiang Acad Agr Sci, Inst Hort Crops, Xinjiang Fruit Sci Observat & Expt Stn, Minist Agr, Xinjiang 830091, Urumqi, Peoples R China
来源
V INTERNATIONAL JUJUBE SYMPOSIUM | 2022年 / 1350卷
基金
中国国家自然科学基金;
关键词
wild jujube; heat stress; HSF; bioinformatics;
D O I
10.17660/ActaHortic.2022.1350.24
中图分类号
S2 [农业工程];
学科分类号
0828 ;
摘要
Heat shock transcription factor (HSF) is one of the important transcription factor families in plants, which plays an important role in the response to biological and abiotic stresses. In this study, based on the transcriptional data of wild jujube (Ziziphus acidojujuba C.Y. Cheng et M.J. Liu) under heat stress, bioinformatics was used to identify and analyze the HSF transcription factor family of wild jujube, and they were named ZjHsf1-ZjHsf20 according to the sequence of chromosomal location, among which, ZjHsf1-ZjHsf17 were unevenly distributed on the 12 chromosomes of jujube; the number of amino acids of all ZjHsf genes ranged from 217 to 560, and most of them were acidic proteins with relatively stable protein structure. Sequence alignment and phylogenetic tree results showed that there was a highly conserved DBD domain in the ZjHsf protein, and the ZjHsf gene family members were divided into A, B and C type according to the number of residual between A and B in the HR-A/B domain. According to the classification of the Arabidopsis Hsf gene family, class A was subdivided into nine subclasses A1-A9, and class B was subdivided into four subclasses B1-B4. The results of conserved motifs and gene structure showed that all ZjHsf genes contained DBD structure, which was composed of Motif1 and Motif2; all ZjHsf genes contain exon and intron structures, and the number of introns varies from 1 to 3. Analysis of cis-elements in the promoter region showed that the promoter sequence of ZjHsf gene contained STRE, MBS, ABRE and other cis-acting regulatory elements that respond to stress. The heat map analysis showed that all ZjHsf genes were involved in the defense response to high temperature stress in wild jujube.
引用
收藏
页码:205 / 214
页数:10
相关论文
共 50 条
  • [41] Transcriptional regulation of small heat shock protein genes by heat shock factor 1 (HSF1) in Liriomyza trifolii under heat stress
    Chang, Ya-Wen
    Wang, Yu-Cheng
    Zhang, Xiao-Xiang
    Iqbal, Junaid
    Lu, Ming-Xing
    Du, Yu-Zhou
    CELL STRESS & CHAPERONES, 2021, 26 (05) : 835 - 843
  • [42] Characterization of the WRKY family transcription factors in Astragalus membranaceus and their expression under drought stress
    Jiemin Wang
    Zhengpu Rong
    Weihong Shi
    Ye Zhang
    Wenshuai Wang
    Yuguang Zheng
    Xiaowei Han
    Huigai Sun
    BMC Plant Biology, 25 (1)
  • [43] Functional analysis of an Arabidopsis transcription factor WRKY25 in heat stress
    Shujia Li
    Qiantang Fu
    Weidong Huang
    Diqiu Yu
    Plant Cell Reports, 2009, 28 : 683 - 693
  • [44] Functional analysis of an Arabidopsis transcription factor WRKY25 in heat stress
    Li, Shujia
    Fu, Qiantang
    Huang, Weidong
    Yu, Diqiu
    PLANT CELL REPORTS, 2009, 28 (04) : 683 - 693
  • [45] Genome-Wide Identification and Expression Analysis of the GRAS Gene Family and Their Responses to Heat Stress in Cymbidium goeringii
    Huang, Ye
    Zheng, Qinyao
    Zhang, Meng-Meng
    He, Xin
    Zhao, Xuewei
    Wang, Linying
    Lan, Siren
    Liu, Zhong-Jian
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2024, 25 (12)
  • [46] Genome-wide identification, classification, and analysis of heat shock transcription factor family in Chinese cabbage (Brassica rapa pekinensis)
    Huang, X. Y.
    Tao, P.
    Li, B. Y.
    Wang, W. H.
    Yue, Z. C.
    Lei, J. L.
    Zhong, X. M.
    GENETICS AND MOLECULAR RESEARCH, 2015, 14 (01): : 2189 - 2204
  • [47] Conservation of a stress response: human heat shock transcription factors functionally substitute for yeast HSF
    Liu, XD
    Liu, PCC
    Santoro, N
    Thiele, DJ
    EMBO JOURNAL, 1997, 16 (21) : 6466 - 6477
  • [48] Heat shock factors in tomatoes: genome-wide identification, phylogenetic analysis and expression profiling under development and heat stress
    Yang, Xuedong
    Zhu, Weimin
    Zhang, Hui
    Liu, Na
    Tian, Shoubo
    PEERJ, 2016, 4
  • [49] Genome-wide identification of the heat shock transcription factor gene family in two kiwifruit species
    Tu, Jing
    Abid, Muhammad
    Luo, Juan
    Zhang, Yi
    Yang, Endian
    Cai, Xinxia
    Gao, Puxin
    Huang, Hongwen
    Wang, Zupeng
    FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [50] Genome-Wide Identification of the Heat Shock Transcription Factor Gene Family in Rosemary (Salvia rosmarinus)
    Cui, Weitong
    Xu, Zongle
    Kong, Yuhua
    Yang, Lin
    Dou, Hao
    Zhang, Dangquan
    Li, Mingwan
    Chen, Yuanyuan
    Ding, Shen
    Yang, Chaochen
    Lai, Yong
    HORTICULTURAE, 2024, 10 (12)