Identification and expression analysis of HSF transcription factor family in wild jujube under heat stress

被引:2
作者
Zhang, H. [1 ,2 ,3 ]
Jin, J. [3 ]
Fan, D. Y. [3 ]
Zhao, X. M. [3 ]
Jia, P. P. [1 ,2 ,3 ]
Hao, Q. [3 ]
Yang, L. [3 ]
Niu, J. X. [1 ,2 ]
机构
[1] Shihezi Univ, Dept Hort, Coll Agr, Shihezi 832003, Xinjiang, Peoples R China
[2] Xinjiang Prod & Construct Crops Key Lab Special F, Shihezi 832003, Xinjiang, Peoples R China
[3] Xinjiang Acad Agr Sci, Inst Hort Crops, Xinjiang Fruit Sci Observat & Expt Stn, Minist Agr, Xinjiang 830091, Urumqi, Peoples R China
来源
V INTERNATIONAL JUJUBE SYMPOSIUM | 2022年 / 1350卷
基金
中国国家自然科学基金;
关键词
wild jujube; heat stress; HSF; bioinformatics;
D O I
10.17660/ActaHortic.2022.1350.24
中图分类号
S2 [农业工程];
学科分类号
0828 ;
摘要
Heat shock transcription factor (HSF) is one of the important transcription factor families in plants, which plays an important role in the response to biological and abiotic stresses. In this study, based on the transcriptional data of wild jujube (Ziziphus acidojujuba C.Y. Cheng et M.J. Liu) under heat stress, bioinformatics was used to identify and analyze the HSF transcription factor family of wild jujube, and they were named ZjHsf1-ZjHsf20 according to the sequence of chromosomal location, among which, ZjHsf1-ZjHsf17 were unevenly distributed on the 12 chromosomes of jujube; the number of amino acids of all ZjHsf genes ranged from 217 to 560, and most of them were acidic proteins with relatively stable protein structure. Sequence alignment and phylogenetic tree results showed that there was a highly conserved DBD domain in the ZjHsf protein, and the ZjHsf gene family members were divided into A, B and C type according to the number of residual between A and B in the HR-A/B domain. According to the classification of the Arabidopsis Hsf gene family, class A was subdivided into nine subclasses A1-A9, and class B was subdivided into four subclasses B1-B4. The results of conserved motifs and gene structure showed that all ZjHsf genes contained DBD structure, which was composed of Motif1 and Motif2; all ZjHsf genes contain exon and intron structures, and the number of introns varies from 1 to 3. Analysis of cis-elements in the promoter region showed that the promoter sequence of ZjHsf gene contained STRE, MBS, ABRE and other cis-acting regulatory elements that respond to stress. The heat map analysis showed that all ZjHsf genes were involved in the defense response to high temperature stress in wild jujube.
引用
收藏
页码:205 / 214
页数:10
相关论文
共 50 条
  • [31] Expression and localization of heat shock factor (Hsf) 1 in the rodent cochlea
    Fairfield, DA
    Kanicki, AC
    Lomax, MI
    Altschuler, RA
    HEARING RESEARCH, 2002, 173 (1-2) : 109 - 118
  • [32] Genome-wide identification and expression analysis of ethylene responsive factor family transcription factors in Juglans regia
    Wang, Tianyu
    Gao, Xiangqian
    Chen, Sisi
    Li, Dapei
    Chen, Shuwen
    Xie, Muhong
    Xu, Zhenggang
    Yang, Guiyan
    PEERJ, 2021, 9
  • [33] Expression divergence of BAG gene family in maize under heat stress
    Farid, Babar
    Saddique, Muhammad Abu Bakar
    Tahir, Muhammad Hammad Nadeem
    Ikram, Rao Muhammad
    Ali, Zulfiqar
    Akbar, Waseem
    BMC PLANT BIOLOGY, 2025, 25 (01):
  • [34] Identification, classification, and expression profiles of heat shock transcription factors in tea plant (Camellia sinensis) under temperature stress
    Liu, Zhi-Wei
    Wu, Zhi-Jun
    Li, Xing -Hui
    Huang, Ying
    Li, Hui
    Wang, Yong-Xin
    Zhuang, Jing
    GENE, 2016, 576 (01) : 52 - 59
  • [35] Genome-Wide Identification, Classification, and Expression Analysis of the Hsf Gene Family in Carnation (Dianthus caryophyllus)
    Li, Wei
    Wan, Xue-Li
    Yu, Jia-Yu
    Wang, Kui-Ling
    Zhang, Jin
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 20 (20)
  • [36] Genome-wide identification, classification, and expression analysis of the HSF gene family in pineapple (Ananas comosus)
    Wang, Lulu
    Liu, Yanhui
    Chai, Mengnan
    Chen, Huihuang
    Aslam, Mohammad
    Niu, Xiaoping
    Qin, Yuan
    Cai, Hanyang
    PEERJ, 2021, 9
  • [37] Genome-wide analysis of the HSF family in Allium sativum L. and AsHSFB1 overexpression in Arabidopsis under heat stress
    Yang, Qing-Qing
    Yang, Feng
    Liu, Can-Yu
    Zhao, Yong-Qiang
    Lu, Xin-Juan
    Ge, Jie
    Zhang, Bi-Wei
    Li, Meng-Qian
    Yang, Yan
    Fan, Ji-De
    BMC GENOMICS, 2024, 25 (01):
  • [38] Identification of AP2/ERF Transcription Factor Family Genes and Expression Patterns in Response to Drought Stress in Pinus massoniana
    Sun, Shuang
    Liang, Xingxing
    Chen, Hu
    Hu, La
    Yang, Zhangqi
    FORESTS, 2022, 13 (09):
  • [39] Spikelet fertility and heat shock transcription factor (Hsf) gene responses to heat stress in tolerant and susceptible rice (Oryza sativa L.) genotypes
    Malumpong, C.
    Cheabu, S.
    Mongkolsiriwatana, C.
    Detpittayanan, W.
    Vanavichit, A.
    JOURNAL OF AGRICULTURAL SCIENCE, 2019, 157 (04) : 283 - 299
  • [40] Transcriptional regulation of small heat shock protein genes by heat shock factor 1 (HSF1) in Liriomyza trifolii under heat stress
    Ya-Wen Chang
    Yu-Cheng Wang
    Xiao-Xiang Zhang
    Junaid Iqbal
    Ming-Xing Lu
    Yu-Zhou Du
    Cell Stress and Chaperones, 2021, 26 : 835 - 843