Identification and expression analysis of HSF transcription factor family in wild jujube under heat stress

被引:2
|
作者
Zhang, H. [1 ,2 ,3 ]
Jin, J. [3 ]
Fan, D. Y. [3 ]
Zhao, X. M. [3 ]
Jia, P. P. [1 ,2 ,3 ]
Hao, Q. [3 ]
Yang, L. [3 ]
Niu, J. X. [1 ,2 ]
机构
[1] Shihezi Univ, Dept Hort, Coll Agr, Shihezi 832003, Xinjiang, Peoples R China
[2] Xinjiang Prod & Construct Crops Key Lab Special F, Shihezi 832003, Xinjiang, Peoples R China
[3] Xinjiang Acad Agr Sci, Inst Hort Crops, Xinjiang Fruit Sci Observat & Expt Stn, Minist Agr, Xinjiang 830091, Urumqi, Peoples R China
来源
V INTERNATIONAL JUJUBE SYMPOSIUM | 2022年 / 1350卷
基金
中国国家自然科学基金;
关键词
wild jujube; heat stress; HSF; bioinformatics;
D O I
10.17660/ActaHortic.2022.1350.24
中图分类号
S2 [农业工程];
学科分类号
0828 ;
摘要
Heat shock transcription factor (HSF) is one of the important transcription factor families in plants, which plays an important role in the response to biological and abiotic stresses. In this study, based on the transcriptional data of wild jujube (Ziziphus acidojujuba C.Y. Cheng et M.J. Liu) under heat stress, bioinformatics was used to identify and analyze the HSF transcription factor family of wild jujube, and they were named ZjHsf1-ZjHsf20 according to the sequence of chromosomal location, among which, ZjHsf1-ZjHsf17 were unevenly distributed on the 12 chromosomes of jujube; the number of amino acids of all ZjHsf genes ranged from 217 to 560, and most of them were acidic proteins with relatively stable protein structure. Sequence alignment and phylogenetic tree results showed that there was a highly conserved DBD domain in the ZjHsf protein, and the ZjHsf gene family members were divided into A, B and C type according to the number of residual between A and B in the HR-A/B domain. According to the classification of the Arabidopsis Hsf gene family, class A was subdivided into nine subclasses A1-A9, and class B was subdivided into four subclasses B1-B4. The results of conserved motifs and gene structure showed that all ZjHsf genes contained DBD structure, which was composed of Motif1 and Motif2; all ZjHsf genes contain exon and intron structures, and the number of introns varies from 1 to 3. Analysis of cis-elements in the promoter region showed that the promoter sequence of ZjHsf gene contained STRE, MBS, ABRE and other cis-acting regulatory elements that respond to stress. The heat map analysis showed that all ZjHsf genes were involved in the defense response to high temperature stress in wild jujube.
引用
收藏
页码:205 / 214
页数:10
相关论文
共 50 条
  • [1] The plant heat stress transcription factor (Hsf) family: Structure, function and evolution
    Scharf, Klaus-Dieter
    Berberich, Thomas
    Ebersberger, Ingo
    Nover, Lutz
    BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2012, 1819 (02): : 104 - 119
  • [2] Genome-wide Identification and Classification of HSF Family in Grape, and Their Transcriptional Analysis under Heat Acclimation and Heat Stress
    LIU Guotian
    CHAI Fengmei
    WANG Yi
    JIANG Jinzhu
    DUAN Wei
    WANG Yuting
    WANG Fangfang
    LI Shaohua
    WANG Lijun
    Horticultural Plant Journal, 2018, 4 (04) : 133 - 143
  • [3] An insight into Pisum sativum HSF gene family-Genome-wide identification, phylogenetic, expression, and analysis of transactivation potential of pea heat shock transcription factor
    Kanwar, Meenakshi
    Chaudhary, Chanderkant
    Anand, Kumar Ankit
    Singh, Shilpi
    Garg, Menus
    Mishra, Sumit Kumar
    Sirohi, Parul
    Chauhan, Harsh
    PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2023, 202
  • [4] Genome-Wide Identification of Heat Shock Transcription Factor Family and Key Members Response Analysis to Heat Stress in Loquat
    Deng, Chaojun
    Chen, Yongping
    Wei, Weilin
    Chen, Xiuping
    Jiang, Jimou
    HORTICULTURAE, 2024, 10 (11)
  • [5] Genome-wide analysis of HSF family transcription factors and their responses to heat stress in Rosa chinensis
    Li, Z. Q.
    Zhang, F. J.
    Liu, C. X.
    Shen, S. Y.
    Jin, X. L.
    Zhang, M. H.
    Wen, Y. F.
    Xing, W.
    III INTERNATIONAL SYMPOSIUM ON GERMPLASM OF ORNAMENTALS, 2020, 1291 : 237 - 248
  • [6] Genome-wide identification and analysis of heat shock transcription factor family in cucumber (Cucumis sativus L.)
    Zhou, Shengjun
    Zhang, Peng
    Jing, Zange
    Shi, Jianlei
    PLANT OMICS, 2013, 6 (06) : 449 - 455
  • [7] Genome-Wide Identification and Expression Analysis of Heat Shock Transcription Factors in Camellia sinensis Under Abiotic Stress
    Li, Guimin
    Shi, Xinying
    Lin, Qinmin
    Lv, Mengmeng
    Chen, Jing
    Wen, Yingxin
    Feng, Zhiyi
    Azam, Syed Muhammad
    Cheng, Yan
    Wang, Shucai
    Cao, Shijiang
    PLANTS-BASEL, 2025, 14 (05):
  • [8] Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses
    Wang, Qi
    Zhang, Zhenbiao
    Guo, Cun
    Zhao, Xiaobo
    Li, Zhiyuan
    Mou, Yifei
    Sun, Quanxi
    Wang, Juan
    Yuan, Cuiling
    Li, Chunjuan
    Cong, Ping
    Shan, Shihua
    FRONTIERS IN PLANT SCIENCE, 2023, 14
  • [9] Genome-wide identification, classification and analysis of heat shock transcription factor family in maize
    Yong-Xiang Lin
    Hai-Yang Jiang
    Zhang-Xin Chu
    Xiu-Li Tang
    Su-Wen Zhu
    Bei-Jiu Cheng
    BMC Genomics, 12
  • [10] Genome-Wide Identification and Expression Analysis of Sucrose Transporter Gene Family in Wheat Lines under Heat Stress
    Hou, Qiling
    Gao, Jiangang
    Qin, Zhilie
    Sun, Hui
    Wang, Hanxia
    Yuan, Shaohua
    Zhang, Fengting
    Yang, Weibing
    AGRONOMY-BASEL, 2024, 14 (07):