PIWI proteins and their interactors in piRNA biogenesis, germline development and gene expression

被引:131
作者
Ku, Hsueh-Yen
Lin, Haifan [1 ]
机构
[1] Yale Univ, Sch Med, Yale Stem Cell Ctr, New Haven, CT 06511 USA
基金
美国国家卫生研究院;
关键词
PIWI; piRNA; TDRD; epigenetic; RNA decay; translational regulation; TUDOR-DOMAIN PROTEIN; EMBRYONIC AXIS SPECIFICATION; NOVO DNA METHYLATION; CELL SELF-RENEWAL; STEM-CELLS; DROSOPHILA-GERMLINE; SMALL RNAS; C; ELEGANS; ARGININE METHYLATION; TRANSPOSON CONTROL;
D O I
10.1093/nsr/nwu014
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
PIWI-interacting RNAs (piRNAs) are a complex class of small non-coding RNAs that are mostly 24-32 nucleotides in length and composed of at least hundreds of thousands of species that specifically interact with the PIWI protein subfamily of the ARGONAUTE family. Recent studies revealed that PIWI proteins interact with a number of proteins, especially the TUDOR-domain-containing proteins, to regulate piRNA biogenesis and regulatory function. Current research also provides evidence that PIWI proteins and piRNAs are not only crucial for transposon silencing in the germline, but also mediate novel mechanisms of epigenetic programming, DNA rearrangements, mRNA turnover, and translational control both in the germline and in the soma. These new discoveries begin to reveal an exciting new dimension of gene regulation in the cell.
引用
收藏
页码:205 / 218
页数:14
相关论文
共 163 条
[21]   Tdrd1/Mtr-1, a tudor-related gene, is essential for male germ-cell differentiation and nuage/germinal granule formation in mice [J].
Chuma, Shinichiro ;
Hosokawa, Mihoko ;
Kitamura, Kouichi ;
Kasai, Shinya ;
Fujioka, Makio ;
Hiyoshi, Masateru ;
Takamune, Kazufurni ;
Noce, Toshiaki ;
Nakatsuji, Norio .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (43) :15894-15899
[22]   The Drosophila SDE3 homolog armitage is required for oskar mRNA silencing and embryonic axis specification [J].
Cook, HA ;
Koppetsch, BS ;
Wu, J ;
Theurkauf, WE .
CELL, 2004, 116 (06) :817-829
[23]   Mouse MAELSTROM: the link between meiotic silencing of unsynapsed chromatin and microRNA pathway? [J].
Costa, Yael ;
Speed, Robert M. ;
Gautier, Philippe ;
Semple, Colin A. ;
Maratou, Klio ;
Turner, James M. A. ;
Cooke, Howard J. .
HUMAN MOLECULAR GENETICS, 2006, 15 (15) :2324-2334
[24]   Tudor domains bind symmetrical dimethylated arginines [J].
Côté, J ;
Richard, S .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2005, 280 (31) :28476-28483
[25]   A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewal [J].
Cox, DN ;
Chao, A ;
Baker, J ;
Chang, L ;
Qiao, D ;
Lin, HF .
GENES & DEVELOPMENT, 1998, 12 (23) :3715-3727
[26]  
Cox DN, 2000, DEVELOPMENT, V127, P503
[27]   Function of Piwi, a nuclear Piwi/Argonaute protein, is independent of its slicer activity [J].
Darricarrere, Nicole ;
Liu, Na ;
Watanabe, Toshiaki ;
Lin, Haifan .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (04) :1297-1302
[28]   miwi, a murine homolog of piwi, encodes a cytoplasmic protein essential for spermatogenesis [J].
Deng, W ;
Lin, HF .
DEVELOPMENTAL CELL, 2002, 2 (06) :819-830
[29]  
Djikeng A, 2001, RNA, V7, P1522
[30]   P-body formation is a consequence, not the cause, of RNA-mediated gene silencing [J].
Eulalio, Ana ;
Behm-Ansmant, Isabelle ;
Schweizer, Daniel ;
Izaurralde, Elisa .
MOLECULAR AND CELLULAR BIOLOGY, 2007, 27 (11) :3970-3981